Journal of Experimental Botany, Vol. 51, No. 345, pp. 659-668,
April 2000
© 2000 Oxford University Press
Review Article |
Chlorophyll fluorescencea practical guide
1 Environmental and Molecular Plant Physiology Laboratory, Department of Agricultural and Environmental Science, The University, Newcastle upon Tyne NE1 7RU, UK
2 University of Manchester, School of Biological Sciences, 3.614 Stopford Building, Oxford Road, Manchester M13 9PT, UK
Received 15 October 1999; Accepted 13 January 2000
| Abstract |
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Chlorophyll fluorescence analysis has become one of the most powerful and widely used techniques available to plant physiologists and ecophysiologists. This review aims to provide an introduction for the novice into the methodology and applications of chlorophyll fluorescence. After a brief introduction into the theoretical background of the technique, the methodology and some of the technical pitfalls that can be encountered are explained. A selection of examples is then used to illustrate the types of information that fluorescence can provide.
Key words: Chlorophyll fluorescence, electron transport, photoinhibition.
| Introduction |
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In recent years, the technique of chlorophyll fluorescence has become ubiquitous in plant ecophysiology studies. No investigation into the photosynthetic performance of plants under field conditions seems complete without some fluorescence data. This trend has been fuelled to a large degree, by the introduction of a number of highly user-friendly (and portable) chlorophyll fluorometers. In spite of the simplicity of the measurements, however, the underlying theory and the interpretation of data remains complex and, in places, controversial. A number of excellent reviews exist that discuss the theoretical background of both measurement and analysis, however, these are typically written from a biophysicist's or a molecular plant physiologist's point of view (Horton and Bowyer, 1990
| The basis of chlorophyll fluorescence measurements |
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The principle underlying chlorophyll fluorescence analysis is relatively straightforward. Light energy absorbed by chlorophyll molecules in a leaf can undergo one of three fates: it can be used to drive photosynthesis (photochemistry), excess energy can be dissipated as heat or it can be re-emitted as lightchlorophyll fluorescence. These three process occur in competition, such that any increase in the efficiency of one will result in a decrease in the yield of the other two. Hence, by measuring the yield of chlorophyll fluorescence, information about changes in the efficiency of photochemistry and heat dissipation can be gained.
Although the total amount of chlorophyll fluorescence is very small (only 1 or 2% of total light absorbed), measurement is quite easy. The spectrum of fluorescence is different to that of absorbed light, with the peak of fluorescence emission being of longer wavelength than that of absorption. Therefore, fluorescence yield can be quantified by exposing a leaf to light of defined wavelength and measuring the amount of light re-emitted at longer wavelengths. It is important to note, however, that this measurement can only ever be relative, since light is inevitably lost. Hence, all analysis must include some form of normalisation, with a wide variety of different fluorescence parameters being calculated (see below).
One modification to basic measuring devices that has been instrumental in revolutionizing the application of chlorophyll fluorescence, has been the use of a modulated measuring system (Quick and Horton, 1984). In such systems, the light source used to measure fluorescence is modulated (switched on and off at high frequency) and the detector is tuned to detect only fluorescence excited by the measuring light. Therefore, the relative yield of fluorescence can now be measured in the presence of background illumination, and, most significantly, in the presence of full sunlight in the field. Most modern fluorometers use such modulated measuring systems and anyone considering investing in a fluorescence system is strongly advised to select a modulated fluorometer.
| Why does fluorescence yield change? The Kautsky effect and beyond |
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Changes in the yield of chlorophyll fluorescence were first observed as early as 1960 by Kautsky and co-workers (Kautsky et al., 1960
When a leaf is transferred from darkness into light, PSII reaction centres are progressively closed. This gives rise (during the first second or so of illumination) to an increase in the yield of chlorophyll fluorescence. Following on from this, however, the fluorescence level typically starts to fall again, over a time-scale of a few minutes. This phenomenon, termed fluorescence quenching, is explained in two ways. Firstly, there is an increase in the rate at which electrons are transported away from PSII; this is due mainly to the light-induced activation of enzymes involved in carbon metabolism and the opening of stomata. Such quenching is referred to as photochemical quenching. At the same time, there is a increase in the efficiency with which energy is converted to heat. This latter process is termed non-photochemical quenching (NPQ). In a typical plant, changes in these two processes will be complete within about 1520 min and an approximate steady-state is attained, although the time taken to reach this state can vary significantly between plant species (Johnson et al., 1990
).
| Deconvoluting fluorescence signals |
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In order to gain useful information about the photosynthetic performance of a plant from measurements of chlorophyll fluorescence yield, it is necessary to be able to distinguish between the photochemical and non-photochemical contributions to quenching. The usual approach is to switch off one of the two contributors, specifically photochemistry, so that the fluorescence yield in the presence of the other alone can be estimated. In vitro this can be achieved by the addition of chemicals, such as the herbicide Diuron (DCMU), that inhibit PSII, reducing photochemistry to zero. This method is, however, both impractical and undesirable in a more physiological context. Instead, a method has been developed, the light doubling technique, that allows the contribution of photochemical quenching to be transiently reduced to zero (Bradbury and Baker, 1981
As well as changes occurring in the efficiency of photochemistry, the efficiency of heat dissipation (i.e. non-photochemical quenching) can change depending on various internal and external factors. Such changes are reflected as changes in the level of Fm. Unlike photochemistry, it is not possible to inhibit heat dissipation totally, so it is not possible to measure the yield of chlorophyll fluorescence in the absence of non-photochemical quenching. Hence, all estimations of non-photochemical quenching are strictly relative to some dark-adapted point (termed here
). For this reason, it is necessary to design experiments in such a way that a dark-adapted, non-stressed reference point can be estimated. This requirement can be a major limitation in field conditions, where it is usual to estimate the pre-dawn value of Fm.
| Quenching analysis |
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In the brief history of chlorophyll analysis, a large number of different coefficients have been calculated to quantify photochemical and non-photochemical quenching and the same parameter will often be referred to in many different ways. Despite attempts to normalize the terminology (van Kooten and Snel, 1990
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The calculation of fluorescence parameters is probably best explained by reference to a typical experimental trace (Fig. 1
). Following on from this, an actinic light is applied and, at appropriate intervals, further saturating flashes are applied. From each of these, a value for
, the fluorescence maximum in the light, can be measured. The steady-state value of fluorescence immediately prior to the flash is termed Ft. After a flash, removal of actinic light (preferably whilst simultaneously giving a far-red light) allows measurement of
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| Photochemical processes |
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Photochemical quenching parameters always relate to the relative value of
and Ft. The most useful is the parameter that measures the efficiency of Photosystem II photochemistry,
PSII (Genty et al., 1989
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PSII is the quantum yield of PSII photochemistry, it can be used to calculate linear electron transport rate (J) and, therefore, overall photosynthetic capacity in vivo (Genty et al., 1989
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PSII by incident light (but see discussion below). Most usefully of all, this is the simplest fluorescence parameter to measure. A measurement can be made by simply pointing a fluorometer at a leaf and flashing a light.
Another widely used fluorescence parameter, measuring photochemistry, is photochemical quenching, qP. This is calculated as:
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PSII, the significance of this parameter is somewhat different. Whilst
PSII is the proportion of absorbed energy being used in photochemistry, qP gives an indication of the proportion of PSII reaction centres that are open. An alternative expression of this is 1-qP, the proportion of centres that are closed and is sometimes termed the excitation pressure on PSII (DP Maxwell et al., 1994
PSII and qP can be interrelated by a third parameter, Fv/Fm (Genty et al., 1989
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or
). So, whilst
PSII relates to achieved efficiency, qP and Fv/Fm provide information about the underlying processes which have altered efficiency. A change in qP is due to closure of reaction centres, resulting from a saturation of photosynthesis by light. A change in Fv/Fm is due to a change in the efficiency of non-photochemical quenching. Dark-adapted values of Fv/Fm reflect the potential quantum efficiency of PSII and are used as a sensitive indicator of plant photosynthetic performance, with optimal values of around 0.83 measured for most plant species (Björkman and Demmig, 1987
A difficulty in the estimation of qP and Fv/Fm is the need to estimate the value of Fo at the time of measurement. In the laboratory, this is achieved by darkening the leaf and, usually, by applying far-red illumination (wavelength >680 nm) for a few seconds before and immediately after the end of illumination. The latter is important to ensure that all PSII reaction centres open rapidly after the end of illumination. Commercial portable fluorometers usually incorporate a far-red light source, however, the technical problems of darkening the leaf in the field remain. These are usually overcome by transiently covering the leaf with a black cloth whilst simultaneously providing far-red light. A method for estimating
, without making direct measurements has recently been proposed (Oxborough and Baker, 1997
). This method was developed specifically for use in fluorescence imaging techniques where estimation of
is particularly problematic. Whilst this method seems to work well under specific laboratory conditions, it makes assumptions about the nature of the processes contributing to fluorescence quenching. As such, it does not necessarily apply under other conditions, especially where the plant is exposed to stress and where significant amounts of photoinhibition may occur. For this reason, the application of this approach is probably best avoided under field conditions.
An alternative expression that is sometimes used and that is essentially identical to Fv/Fm is Fv/Fo (Krause and Weis, 1991
). Although perhaps not such an intuitive parameter (it does not give a direct measure of efficiency), it has the advantage of being more sensitive to changes in efficiency at high values and so, in some circumstances, may be a better way of expressing data.
| Non-photochemical processes |
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The problem of needing to dark-adapt leaves also applies when quantifying non-photochemical quenching. Here, however, the problems are exacerbated by the need to measure a dark-adapted value of Fm. This value would typically be measured, in the laboratory, after between a full night and 24 h of dark-adaptation. There is also the implicit assumption in such experiments that the plants have not been exposed to any stress prior to the start of the experiment. The aim of such procedures is to attain a reference level of Fm in which photochemical efficiency is at its maximum and heat dissipation is at a minimum. In field experiments, it is possible to measure the pre-dawn value of Fm and use this as a reference point, however, this may be sensitive to the prehistory of the plant. Changes in the dawn Fv/Fm may, however, give important information concerning the effect on the plant of environmental stress (see below).
The most straightforward way of quantifying non-photochemical quenching is by measuring the ratio of a change in Fm to the final value of Fm:
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In order to appreciate the physiological significance of non-photochemical quenching, it is necessary to understand the processes that contribute to the quenching. Any change in NPQ measures a change in the efficiency of heat dissipation, relative to the dark-adapted state. Broadly, such an increase can occur as a result either of processes that protect the leaf from light-induced damage or of the damage itself. An alternative way of looking at these processes is in terms of the rate at which they relax following a period of illumination. Different processes have different relaxation times ranging from a few minutes to several hours. The kinetics of relaxation of these different processes can, therefore, be used to distinguish them.
Under most conditions, the major contributor to NPQ, is termed high energy state quenching (often referred to as qE) and is thought to be essential in protecting the leaf from light-induced damage (for review see Horton et al., 1996
). This process requires the presence of a low pH in the lumen of the thylakoid and involves the light-induced formation of the carotenoid zeaxanthin (Demmig-Adams, 1990
; Demmig-Adams and Adams, 1992
). High energy state quenching relaxes within minutes when the leaf is placed in darkness. A second process that relaxes over a time scale of a few minutes is termed a state transition (qT) (Walters and Horton, 1991
). State transitions involve the reversible phosphorylation of light-harvesting proteins and are thought to be important in balancing the distribution of light energy between Photosystems I and II at low light. These two forms of quenching cannot easily be distinguished from their relaxation kinetics, however, qT generally only makes a small contribution to overall quenching and is only present at low light. For most purposes, all processes that relax over a time-scale of a few minutes following the cessation of illumination can be regarded as photoprotective processes.
Processes that relax over a longer time-scale (hours) are usually collectively referred to as photoinhibition (qI). It is important to note that this term, when applied to fluorescence analysis, generally refers to both protective processes and to damage to the reaction centres of PSII (Osmond, 1994), whilst in more molecular studies, it is specifically the latter that is referred to as photoinhibition. Photoprotective processes with long relaxation times have been related to the presence of zeaxanthin and are thought to occur in the light-harvesting antenna of PSII (Horton et al., 1996
). Damage to PSII reaction centres results in quenching occurring within the PSII reaction centre. This distinction between antenna and reaction centre processes is important because, whilst the former cause changes in the Fo level of quenching, the latter do not and, as such, they can to some extent be distinguished, at least under laboratory conditions.
To attain a full understanding of the contribution of fast and slow relaxing quenching, under physiological conditions, it is necessary to perform relaxation analysis (Walters and Horton, 1991
). In such an experiment, quenching is allowed to relax and Fm recorded at regular intervals. As each estimation of Fm involves giving a leaf a saturating flash, it is important that the interval between these is carefully selected, such that any effect of the flash has relaxed before the next is applied. Typically, an interval of 5 min is sufficient, with relaxation being followed over 45 min to 1 h. A graph is then produced of log(Fm) against time. Extrapolation of data points recorded towards the end of the relaxation back to the time where the actinic light was removed, allows the calculation of the value of Fm (
) that would have been attained if only slowly relaxing quenching had been present in the light. Slowly and rapidly relaxing quenching can then be calculated using the following formulae:
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. After 5 min, however, there is likely to be a significant contribution of rapidly-relaxing quenching remaining and so this is likely to give a significant underestimate of NPQF and a corresponding overestimate of NPQS. A single flash after 30 min, may give a sufficiently accurate estimate of
under field conditions. | Alternative approaches to chlorophyll fluorescence analysis |
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In addition to the quenching analysis approach outlined above, recent work has explored the possibilities of analysing the kinetics of the fluorescence rise resulting from the transfer of a leaf from dark to light. One significant advantage of this approach is that it allows information to be attained using simple (cheaper) non-modulated fluorometers. Work by, in particular, Strasser and co-workers (Stirbet et al., 1998
| What can chlorophyll fluorescence do for you? |
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The discussion above has covered theoretical and technical considerations about chlorophyll fluorescence analysis. The rest of this review is intended to examine the question of how this theory can be applied to obtain useful information in field and laboratory ecophysiology studies. As has been stated already, chlorophyll fluorescence gives information about the state of Photosystem II. It can tell you the extent to which PSII is using the energy absorbed by chlorophyll and the extent to which it is being damaged by excess light. This may sound like fairly obscure information, of relevance only to those with a specialist interest in PSII, however, it is of much wider importance to the physiology of a plant. The flow of electrons through PSII is indicative, under many conditions, of the overall rate of photosynthesis. It gives us the potential to estimate photosynthetic performance, under conditions in which other methods would fail, in a manner that is almost instantaneous. PSII is also accepted to be the most vulnerable part of the photosynthetic apparatus to light-induced damage. Damage to PSII will often be the first manifestation of stress in a leaf. Although fluorescence is a powerful technique, it is also limited. It is easy to measure but, if experiments are not designed correctly, it can also be impossible to interpret. The most powerful and elegant applications of fluorescence do not use this technique alone, but combine it with other techniques, in particular, gas exchange measurements, to obtain a full picture of the response of plants to their environment.
| PSII quantum yield as a proxy measure of photosynthesis |
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One of the main attractions of chlorophyll fluorescence is that it appears to give a measure of photosynthesis. This is, however, a great simplification and failure to appreciate this point can lead the user into difficulties. Fluorescence can be used to measure the efficiency of PSII photochemistry. As indicated above, this can be converted into a relative rate of linear electron transport by multiplying by the light intensity. Photosynthesis is usually thought of as being the gross rate of carbon fixation. Under laboratory conditions, PSII electron transport and CO2 fixation can correlate very well (Genty et al., 1989
PSIIxirradiance assumes that the light absorbed per PSII is constant. For leaves growing in different microclimates, this will typically not be true. This can be partially overcome if absorbance can be measured directly, using an integrating sphere, however, the problem of differences in photosystem stoichiometry remain. Thus, fluorescence can never be used to make comparative measurements of photosynthesis between different leaves or plants. For the above reasons, measurements of gas exchange, using infrared gas analysers, remain at the heart of studies in plant ecophysiology.
Provided the above reservations are borne in mind,
PSII can provide useful information concerning photosynthetic performance in the field. In particular, fluorescence can give a good, rapid and minimally invasive measurement of changes in a particular sample (or in samples that can be considered to be homogenous) through time. For example, fluorescence has been used (Murchie et al., 1999
) to follow the electron transport rate in particular leaves of two rice cultivars throughout the day at different developmental stages. Individual leaves were marked and subsequent measurements made on the same leaves, so ensuring comparability between measurements. A similar approach was used in following diurnal changes in electron transport in loblolly pine trees exposed to elevated CO2, using free-air CO2 enrichment (FACE) (Hymus et al., 1999
). These authors observed that, whilst, in summer, elevation of CO2 results in an increase in electron transport, in winter, electron transport is inhibited. A relatively greater increase in
PSII was observed during sunflecks in a terrestrial CAM bromeliad, as compared to sympatric C3 species within a Panamanian rainforest (Skillman and Winter, 1997
). This reflects the greater energetic demand of decarboxylation of nocturnally accumulated organic acid in the CAM plant, relative to the costs of C3 photosynthesis (including photorespiration), which supports light use under potentially damaging incident PFD. As in the previous example, a comparison is made relative to measurements in the same leaf, so that differences in absorbance are likely to be insignificant.
Another application where fluorescence may be useful is in examining the acclimation of plants to different microenvironments. By measuring the light dependency of
PSII it is possible to make simple and rapid estimates of the light saturation behaviour of different plants under field conditions. This does not allow a comparison of the absolute rates of photosynthesis between sites, but can be useful when studying samples, such as lichens and bryophytes, whose structure makes them difficult to study with conventional gas exchange.
Problems may arise when measurements of electron transport rate are made in the open (especially in the laboratory), when fluctuating levels of CO2 (often generated by the experimenter's exhalations) preclude in-depth analysis of the relationship between the light and dark reactions of photosynthesis. Therefore, specialized leaf cuvettes or gas-tight leaf chambers which incorporate ports which house the fibre optic cable(s) should be used where practicable. The system should limit self-shading whilst maximizing fluorescence yield, with the fibre commonly positioned at an angle of 4560° to the leaf. Important information may be obtained if it is possible to control the gas supply to a leaf. The Hansatech leaf disc electrode chamber has been used to vary ambient CO2 and O2 (Lovelock and Winter, 1996
) and to assess the capacity for electron flux through the photorespiratory and Mehler-ascorbate peroxidase pathway (pseudocyclic electron transport) and the relationship with photoinhibition and leaf senescence in an evergreen (Ficus) and deciduous (Pseudobombax) tropical tree species. In a different approach which exemplifies the novel kind of systems which can be used, diffusion limitations across the lichen thallus was investigated in Lobaria scrobiculata. The thallus was sealed in a custom-built gas-tight Petri dish and flushed with nitrogen, with CO2 diffusion through different areas and thickness of the thallus assessed by tracking the recovery of
PSII under low light when air was reintroduced to the system (Máguas et al., 1997
).
| Relating electron transport to carbon fixation |
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Despite the fact that fluorescence emanates from only the top few layers of chlorenchyma, whereas gas exchange is integrated across the thickness of the leaf, simultaneous measurements have emerged as a powerful tool for investigating the relationship between light use efficiency, CO2 fixation and photoinhibition. A relatively simple and widely used technique involves exploring the empirical relationship between electron transport and CO2 fixation in vivo. Simultaneous measurements are made of CO2 assimilation and
PSII under non-photorespiratory conditions (elevated CO2 or 12% O2) at different light intensities. A linear plot of the quantum yield of CO2 fixation (
CO2) and PSII photochemistry (
PSII) allows the electron requirement per molecule CO2 fixed to be quantified (Epron et al., 1995
Meyer and Genty used high resolution images of
PSII to define leaf internal CO2 concentration (Ci) following ABA treatment in leaves of Rosa rubiginosa (Meyer and Genty, 1998
). Measurements of Ci made conventionally using gas exchange techniques during drought may be over-estimated as a consequence of both patchy stomatal response and an under-estimation of cuticular transpiration. This use of chlorophyll fluorescence has suggested that the primary effect of drought stress is one of stomatal closure with a resulting decreasing in internal CO2 concentration which may limit carboxylation (Meyer and Genty, 1998
, 1999
; Sánchez-Rodríguez et al., 1999
). The technique does not require fluorescence imaging equipment and has been performed with combined measurements of gas exchange and fluoromtery. Sánchez-Rodríguez and co-workers used the empirical relationship between the ratio of
PSII/CO2 assimilation rate and Ci in control leaves subsequently to model Ci in droughted leaves (Sánchez-Rodríguez et al., 1999
). However, the methodology requires that this relationship does not change following the imposition of stress, that alternative electron flow (i.e. to the Mehler-peroxidase reaction) is negligible and that respiratory rates do not differ significantly between treatments. It is also necessary that Ci can be accurately determined by gas exchange in control leaves, which may preclude species with an inherently low stomatal or cuticular conductance.
Fluorescence analysis can also be applied to understanding the effects of low and high temperatures. For example, comparisons of the yield of CO2 fixation (
CO2) and
PSII were made to provide evidence that, when exposed to low temperatures, maize increases electron transport to alternative electron sinks, probably generating active oxygen species (Fryer et al., 1998
). Early in the growing season, the ratio of
PSII/
CO2 was higher than that seen in unstressed, fully developed leaves, suggesting that electrons were being used in pathways other than CO2 fixation. This increase was accompanied by an increase in the capacity of antioxidation systems, implying that the leaves were suffering from oxidative stress at this time.
| Measuring stress and stress tolerance |
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Although fluorescence measurements may sometimes provide a useful measure of the photosynthetic performance of plants, its real strength lies in its ability to give information that is not readily available in other ways. In particular, fluorescence can give insights into the ability of a plant to tolerate environmental stresses and into the extent to which those stresses have damaged the photosynthetic apparatus. The advent and refinement of portable fluorometers has led to an upsurge in the use of chlorophyll fluorescence measurements under field conditions. Measurements made over a diurnal course can yield information pertaining to NPQ, electron transport rates, quantum efficiency, and the extent of photoinhibition in response to light, temperature and other single or combined environmental stresses (Bilger et al., 1995
However, over recent years, fluorescence techniques have become increasingly refined and dark-adapted measurements made in combination with those in the light now allow extremely detailed analyses of photosynthetic performance in situ. A very elegant example of the use of chlorophyll fluorescence in the field, comes from studies made on the cactus species Opuntia macrorhiza during September in the Rocky Mountains of North America (Barker and Adams, 1997
). A thorough investigation was made of photochemical efficiency, photosynthesis and xanthophyll cycle activity in differently oriented cladodes, which received contrasting PFD and temperature over the course of the day. The study confirmed that photosynthetic organs which are subject to a high integrated PFD (in this example south- and west-facing cladodes) usually have a large xanthophyll cycle pool, with de-epoxidation of violaxanthin to antheraxanthin and zeaxanthin strongly related to high NPQ (Demmig-Adams, 1990
; Demmig-Adams and Adams, 1992
). In all cases, high NPQ occurred early in the photoperiod during periods of low temperatures, whilst all cladodes exhibited a midday reduction in NPQ coincident with decarboxylation of malic acid. The south- and west-facing cladodes were subject to a second reduction in photosynthetic efficiency during the afternoon, when incident PFD was maximal on these organs. These cladodes exhibited a sustained photoinhibitory depression of Fv/Fm during the night which was associated with retention of zeaxanthin and antheraxanthin, in a photoprotective strategy which effectively primes the photosynthetic apparatus for non-photochemical quenching at dawn. Additionally, the study examined the interplay between light use and dissipation over the diurnal course, as quantified using chlorophyll fluorescence.
Recently, it has been demonstrated that the expression of xanthophyll-cycle dependent NPQ may be fine-tuned to changes in the environment (Adams et al., 1999
). This observation was made for two vine species growing in an understorey of a Eucalyptus forest in Australia. High xanthophyll pigment de-epoxidation levels were observed following an initial sunfleck, which were maintained over the majority of the day, whilst NPQ fluctuated dependent on incident PFD. In contrast, exposed plants of the same species exhibited more closely related light-dependent changes in the de-epoxidation state and the rate of thermal dissipation. It is suggested that NPQ is modulated by transthylakoid
pH, mediated by subtle changes in electron transport rate which can effectively promote immediate quenching during sunflecks, but which would not significantly limit carbon gain in the periods between flecks (Adams et al., 1999
).
A similar approach has been adopted to quantify the fates of light energy in exposed and shaded leaves of the tropical hemi-epiphyte Clusia minor (Roberts et al., 1998
). In this example, a combination of both high photosynthetic light use and thermal dissipation minimized the accumulation of excess excitation energy and the probability of photodamage. In contrast, responses of slow-growing epiphytic bromeliads with a low photosynthetic capacity were dominated by extremely high levels of NPQ and minimal light use (Griffiths and Maxwell, 1999
).
Although, as stated above, full deconvolution of NPQ is not normally practical in the field, simple measurements of relaxed Fm can provide insights into plants stress responses. For example, epiphytic bromeliads are extremely slow growing and carboxylation is limited throughout the day, and all the species studied have a capacity for high levels of NPQ in response to high light (C Maxwell et al., 1994
; Skillman and Winter, 1997
). A detailed experiment, undertaken using a single pulse to determine
in the field, revealed that shade-tolerant plants exhibited a higher proportion of sustained photoinhibitory NPQ, as compared to plants experiencing higher light which exhibited the same instantaneous level of NPQ (Griffiths and Maxwell, 1999
).
| Conclusion |
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In this review, an attempt to give a taste of the ways in which chlorophyll fluorescence analysis can be applied in ecophysiological studies and the complications that can arise has been made. Because it is so easy to generate data with chlorophyll fluorescence, it is also easy to generate large amounts of meaningless data and care must always be taken in the design and execution of experiments to ensure that data are informative. That said, fluorescence remains a powerful technique, the use of which looks set to continue rising in years to come.
| Notes |
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3 To whom correspondence should be addressed. Fax: + 44 161 275 3938. E-mail:giles.johnson{at}man.ac.uk
| Abbreviations |
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Fv /Fm, ratio of variable to maximum fluorescencethe quantum efficiency of open photosystem II centres; Fm, maximum fluorescence yield; Fo, minimum fluorescence yield; Fs or Ft, steady-state fluorescence yield; J, photosynthetic electron transport rate (µequiv m-2 s-1); NPQ, non-photochemical quenching; PFD, photon flux density (400700 nm); PSII, photosystem II, qP, photochemical quenching; qE, energy-dependent quenching; qI, photoinhibitory quenching; qT, quenching related to state transitions; QA, primary quinone acceptor of photosystem II;
pH, transthylakoid pH gradient;
PSII, quantum yield of photosystem II photochemistry..| References |
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Adams III WW, Demmig-Adams B, Logan BA, Barker DH, Osmond CB.1999. Rapid changes in xanthophyll cycle-dependent energy dissipation and photosystem II efficiency in two vines, Stephania japonica and Smilax australis, growing in the understorey of an open Eucalyptus forest. Plant, Cell and Environment 22, 125136.
Barker DH, Adams III WW.1997. The xanthophyll cycle and energy dissipation in differently oriented faces of the cactus Opuntia macrorhiza. Oecologia 109, 353361.[Web of Science]
Bilger W, Björkman O.1990. Role of the xanthophyll cycle in photoprotection elucidated by measurements of light-induced absorbance changes, fluorescence and photosynthesis in Hedera canariensis. Photosynthesis Research 25, 173185.
Bilger W, Schreiber U, Bock M.1995. Determination of the quantum efficiency of photosystem II and of non-photochemical quenching of chlorophyll fluorescence in the field. Oecologia 102, 425432.[Web of Science]
Björkman O, Demmig B.1987. Photon yield of O2 evolution and chlorophyll fluorescence at 77k among vascular plants of diverse origins. Planta 170, 489504.[Web of Science]
Bradbury M, Baker NR.1981. Analysis of the slow phases of the in vivo chlorophyll fluorescence induction curve. Changes in the redox state of photosystem II electron acceptors and fluorescence emission from photosystems I and II. Biochimica et Biophysica Acta 635, 542551.[Medline]
Cornic G, Briantais J-M.1991. Partitioning of photosynthetic electron flow between CO2 and O2 reduction in a C3 leaf (Phaseolus vulgaris L.) at different CO2 concentrations and during drought stress. Planta 183, 178184.[Web of Science]
Demmig-Adams B.1990. Carotenoids and photoprotection in plants. A role for the xanthophyll zeaxanthin. Biochimica et Biophysica Acta 1020, 124.
Demmig-Adams B, Adams III WW.1992. Photoprotection and other responses of plants to high light stress. Annual Review of Plant Physiology and Plant Molecular Biology 43, 599626.[Web of Science]
Demmig-Adams B, Adams III WW, Logan BA, Verhoeven AS.1995. Xanthophyll-cycle-dependent energy dissipation and flexible photosystem II efficiency in plants acclimated to light stress. Australian Journal of Plant Physiology 22, 249260.[Web of Science]
Edwards GE, Baker NR.1993. Can CO2 assimilation in maize leaves be predicted accurately from chlorophyll fluorescence analysis? Photosynthesis Research 37, 89102.
Epron D, Godard D, Cornic G, Genty B.1995. Limitation of net CO2 assimilation rate by internal resistances to CO2 transfer in the leaves of two tree species (Fagus sylvatica L. and Castanea sativa Mill.). Plant, Cell and Environment 18, 4351.
Epron D, Dreyer E, Bréda N.1992. Photosynthesis of oak trees (Quercus petraea (Matt) Liebl.) during drought stress under field conditions: diurnal course of net CO2 assimilation and photochemical efficiency of photosystem II. Plant, Cell and Environment 15, 809820.
Fryer MJ, Andrews JR, Oxborough K, Blowers DA, Baker NR.1998. Relationship between CO2 assimilation, photosynthetic electron transport, and active O2 metabolism in leaves of maize in the field during periods of low temperature. Plant Physiology 116, 571580.
Gamon JA, Pearcy RW.1989. Leaf movement, stress avoidance and photosynthesis in Vitis californica. Oecologia 79, 475481.[Web of Science]
Genty B, Briantais J-M, Baker NR.1989. The relationship between quantum yield of photosynthetic electron transport and quenching of chlorophyll fluorescence. Biochimica et Biophysica Acta 990, 8792.[Web of Science]
Govindjee.1995. Sixty-three years since Kautsky: chlorophyll a fluorescence. Australian Journal of Plant Physiology 22, 131160.[Web of Science]
Griffiths H, Maxwell K.1999. In memory of CS Pittendrigh: photoprotective strategies in epiphytic bromeliads in relation to exposure within the forest canopy. Functional Ecology 13, 1523.
Groom QJ, Baker NR.1992. Analysis of light-induced depressions of photosynthesis in leaves of a wheat crop during the winter. Plant Physiology 100, 12171223.
He J, Chee CW, Goh CJ.1996. Photoinhibition of Heliconia under natural tropical conditions: the importance of leaf orientation for light interception and leaf temperature. Plant, Cell and Environment 19, 12381248.
Horton P, Bowyer JR.1990. Chlorophyll fluorescence transients. In: Harwood J, Bowyer JR, eds. Methods in Plant Biochemistry. London: Academic Press, 259296.
Horton P, Ruban AV, Walters RG.1996. Regulation of light harvesting in green plants. Annual Review of Plant Physiology and Plant Molecular Biology 47, 655684.[Web of Science]
Hymus GJ, Ellsworth DS, Baker NR, Long SP.1999. Does free-air carbon dioxide enrichment affect photochemical energy use by evergreen trees in different seasons? A chlorophyll fluorescence study of mature loblolly pine. Plant Physiology 120, 11831191.
Johnson GN, Scholes JD, Grime JP, Horton P.1990. in Proceedings of the VIIIth International Congress on Photosynthesis.
Johnson GN, Young AJ, Scholes JD, Horton P.1993. The dissipation of excess excitation energy in British plant species. Plant, Cell and Environment 16, 673679.
Kautsky H, Appel W, Amann H.1960. Chlorophyllfluorescenz und kohlensaureassimilation. Biochemische Zeitschrift 322, 277292.
Krause GH, Weis E.1991. Chlorophyll fluorescence and photosynthesis: the basics. Annual Review of Plant Physiology and Plant Molecular Biology 42, 313249.[Web of Science]
Lovelock CE, Winter K.1996. Oxygen-dependent electron transport and protection from photoinhibition in leaves of tropical tree species. Planta 198, 580587.[Web of Science]
Máguas C, Valladares F, Brugnoli E.1997. Effects of thallus size on morphology and physiology of foliose lichens: new findings with a new approach. Symbiosis 23, 149164.
Maxwell C, Griffiths H, Young AJ.1994. Photosynthetic acclimation to light and water stress by the C3-CAM epiphyte Guzmania monostachia: gas exchange characteristics, photochemical efficiency and the xanthophyll cycle. Functional Ecology 8, 746754.[Web of Science]
Maxwell DP, Falk S, Trick CG, Huner NPA.1994. Growth at low temperature mimics high-light acclimation in Chlorella vulgaris. Plant Physiology 105, 535543.[Abstract]
Meyer S, Genty B.1998. Mapping intercellular CO2 mole fraction (Ci) in Rosa rubiginosa leaves fed with abscisic acid by using chlorophyll fluorescence imaging. Plant Physiology 116, 947957.
Meyer S, Genty B.1999. Heterogenous inhibition of photosynthesis over the leaf surface of Rosa rubiginosa L. during water stress and abscisic acid treatment: induction of a metabolic component by limitation of CO2 diffusion. Planta 210, 126131.[Web of Science][Medline]
Murchie EH, Chen YZ, Hubbart S, Peng SB, Horton P.1999. Interactions between senescence and leaf orientation determine in situ patterns of photosynthesis and photoinhibition in field-grown rice. Plant Physiology 119, 553563.
Niinemets U, Bilger W, Kull O, Tenhunen JD.1999. Responses of foliar photosynthetic electron transport, pigment stoichiometry and stomatal conductance to interacting environmental factors in a mixed species canopy. Tree Physiology 19, 839852.[Abstract]
Ögren E, Sjöström M.1990. Estimation of the effect of photoinhibition on the carbon gain in leaves of a willow canopy. Planta 181, 560567.[Web of Science]
Osmond CB.1994. What is photoinhibition? Some insights from comparisons of sun and shade plants. In: Baker NR, Bowyer JR, eds. Photoinhibition of photosynthesis: from molecular mechanisms to the field. Oxford: Bios Scientific Publishers, 124.
Oxborough K, Baker NR.1997. Resolving chlorophyll a fluorescence images of photosynthetic efficiency into photochemical and non-photochemical componentscalculation of qP and
/
without measuring
. Photosynthesis Research 54, 135142.
Quick WP, Horton P.1984 Studies on the induction of chlorophyll fluorescence in barley protoplasts. I. Factors affecting the observation of oscillations in the yield of chlorophyll fluorescence and the rate of oxygen evolution. Proceedings of the Royal Society of London B 220, 361370.
Roberts A, Borland AM, Maxwell K, Griffiths H.1998. Ecophysiology of the C3-CAM intermediate Clusia minor L. in Trinidad: seasonal and short-term photosynthetic characteristics of sun and shade leaves. Journal of Experimental Botany 49, 15631573.
Sánchez-Rodríguez, Pérez P, Martínez-Carrasco R.1999. Photosynthesis, carbohydrate levels and chlorophyll fluorescence-estimated intercellular CO2 in water-stressed Casuarina equisetifolia Forst. & Forst. Plant, Cell and Environment 22, 867873.
Skillman JB, Winter K.1997. High photosynthetic capacity in a shade-tolerant Crassulacean acid metabolism plant. Plant Physiology 113, 441450.[Abstract]
Stirbet A, Govindjee, Strasser BJ, Strasser RJ.1998. Chlorophyll fluorescence in higher plants: modelling and numerical simulation. Journal of Theoretical Biology 193, 131151.
Valentini R, Epron D, De Angelis P, Matteucci G, Dreyer E.1995. In situ estimation of net CO2 assimilation, photosynthetic electron flow and photorespiration in Turkey oak (Q. cerris L.) leaves: diurnal cycles under different levels of water supply. Plant, Cell and Environment 18, 631640.
Valladares F, Pearcy RW.1997. Interactions between water stress, sunshade acclimation, heat tolerance and photoinhibition in the sclerophyll Heteromeles arbutifolia. Plant, Cell and Environment 20, 2536.
van Kooten O, Snell JFH.1990. The use of chlorophyll fluorescence nomenclature in plant stress physiology. Photosynthesis Research 25, 147150.
Walters RG, Horton P.1991. Resolution of components of non-photochemical chlorophyll fluorescence quenching in barley leaves. Photosynthesis Research 27, 121133.
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||||
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||||
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||||
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||||
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P. Wang, W. Duan, A. Takabayashi, T. Endo, T. Shikanai, J.-Y. Ye, and H. Mi Chloroplastic NAD(P)H Dehydrogenase in Tobacco Leaves Functions in Alleviation of Oxidative Damage Caused by Temperature Stress Plant Physiology, June 1, 2006; 141(2): 465 - 474. [Abstract] [Full Text] [PDF] |
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A. Mateo, D. Funck, P. Muhlenbock, B. Kular, P. M Mullineaux, and S. Karpinski Controlled levels of salicylic acid are required for optimal photosynthesis and redox homeostasis J. Exp. Bot., May 1, 2006; 57(8): 1795 - 1807. [Abstract] [Full Text] [PDF] |
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D. Kornyeyev, B. A. Logan, D. T. Tissue, R. D. Allen, and A. S. Holaday Compensation for PSII Photoinactivation by Regulated Non-photochemical Dissipation Influences the Impact of Photoinactivation on Electron Transport and CO2 Assimilation Plant Cell Physiol., April 1, 2006; 47(4): 437 - 446. [Abstract] [Full Text] [PDF] |
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R. S. Quilliam, P. J. Swarbrick, J. D. Scholes, and S. A. Rolfe Imaging photosynthesis in wounded leaves of Arabidopsis thaliana J. Exp. Bot., January 1, 2006; 57(1): 55 - 69. [Abstract] [Full Text] [PDF] |
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J. H. Mussgnug, L. Wobbe, I. Elles, C. Claus, M. Hamilton, A. Fink, U. Kahmann, A. Kapazoglou, C. W. Mullineaux, M. Hippler, et al. NAB1 Is an RNA Binding Protein Involved in the Light-Regulated Differential Expression of the Light-Harvesting Antenna of Chlamydomonas reinhardtii PLANT CELL, December 1, 2005; 17(12): 3409 - 3421. [Abstract] [Full Text] [PDF] |
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N. Keren, H. Ohkawa, E. A. Welsh, M. Liberton, and H. B. Pakrasi Psb29, a Conserved 22-kD Protein, Functions in the Biogenesis of Photosystem II Complexes in Synechocystis and Arabidopsis PLANT CELL, October 1, 2005; 17(10): 2768 - 2781. [Abstract] [Full Text] [PDF] |
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M. J. W. Revill, S. Stanley, and J. M. Hibberd Plastid genome structure and loss of photosynthetic ability in the parasitic genus Cuscuta J. Exp. Bot., September 1, 2005; 56(419): 2477 - 2486. [Abstract] [Full Text] [PDF] |
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N. Hirotsu, A. Makino, S. Yokota, and T. Mae The Photosynthetic Properties of Rice Leaves Treated with Low Temperature and High Irradiance Plant Cell Physiol., August 1, 2005; 46(8): 1377 - 1383. [Abstract] [Full Text] [PDF] |
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M. E. El-Lithy, G. C. Rodrigues, J. J. S. van Rensen, J. F. H. Snel, H. J. H. A. Dassen, M. Koornneef, M. A. K. Jansen, M. G. M. Aarts, and D. Vreugdenhil Altered photosynthetic performance of a natural Arabidopsis accession is associated with atrazine resistance J. Exp. Bot., June 1, 2005; 56(416): 1625 - 1634. [Abstract] [Full Text] [PDF] |
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C. G. Bartoli, F. Gomez, G. Gergoff, J. J. Guiamet, and S. Puntarulo Up-regulation of the mitochondrial alternative oxidase pathway enhances photosynthetic electron transport under drought conditions J. Exp. Bot., May 1, 2005; 56(415): 1269 - 1276. [Abstract] [Full Text] [PDF] |
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K. Kim and A. R. Portis Jr Temperature Dependence of Photosynthesis in Arabidopsis Plants with Modifications in Rubisco Activase and Membrane Fluidity Plant Cell Physiol., March 1, 2005; 46(3): 522 - 530. [Abstract] [Full Text] [PDF] |
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M. Klenell, S. Morita, M. Tiemblo-Olmo, P. Muhlenbock, S. Karpinski, and B. Karpinska Involvement of the Chloroplast Signal Recognition Particle cpSRP43 in Acclimation to Conditions Promoting Photooxidative Stress in Arabidopsis Plant Cell Physiol., January 15, 2005; 46(1): 118 - 129. [Abstract] [Full Text] [PDF] |
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J. A. Cruz, T. J. Avenson, A. Kanazawa, K. Takizawa, G. E. Edwards, and D. M. Kramer Plasticity in light reactions of photosynthesis for energy production and photoprotection J. Exp. Bot., January 1, 2005; 56(411): 395 - 406. [Abstract] [Full Text] [PDF] |
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MB) and the zero fluorescence level is measured (Fo). Application of a saturating flash of light (



















