Skip Navigation

This Article
Right arrow Abstract Freely available
Right arrow FREE Full Text (PDF) Freely available
Right arrow E-letters: Submit a response
Right arrow Alert me when this article is cited
Right arrow Alert me when E-letters are posted
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (9)
Right arrowRequest Permissions
Right arrow Disclaimer
Google Scholar
Right arrow Articles by Tanaka, A.
Right arrow Articles by Watanabe, H.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Tanaka, A.
Right arrow Articles by Watanabe, H.
Agricola
Right arrow Articles by Tanaka, A.
Right arrow Articles by Watanabe, H.
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Journal of Experimental Botany, Vol. 53, No. 369, pp. 683-687, April 1, 2002
© 2002 Oxford University Press


Original Papers

Positional effect of cell inactivation on root gravitropism using heavy-ion microbeams

Atsushi Tanaka1, Yasuhiko Kobayashi, Yoshihiro Hase and Hiroshi Watanabe

Department of Radiation Research for Environment and Resources, Takasaki Radiation Chemistry Research Establishment, Japan Atomic Energy Research Institute (JAERI), Watanuki-machi 1233, Takasaki, Gunma 370-1292, Japan

Received 30 June 2001; Accepted 7 November 2001


    Abstract
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
When primary root apical tissues of Arabidopsis thaliana were irradiated by heavy-ion microbeams with 120 µm diameter, strong inhibition of root elongation and curvature were observed at the root tip. Irradiation of the cells that become the lower part of the root cap after gravistimulation showed strong inhibition of root curvature, whereas irradiation of the cells that become the upper part of the root cap after gravistimulation did not show severe damage in either root curvature or root growth. Further analysis using smaller area microbeams with 40 µm diameter indicated that the greatest inhibition of curvature occurred at the root tip and the next greatest inhibition occurred in the cells in the lower part of the root cap. These results indicate not only that the root tip and columella cells are the most sensitive sites for root gravity, but also that signalling of root gravity would go through the lower part of the cap cells after perception.

Key words: Arabidopsis, heavy ions, microbeam, root gravitropism, signalling.


    Introduction
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
Root gravitropism, although simple to define, is a wondrously complex phenomenon in plants, as has been revealed by physiological and genetical studies (reviewed in Masson, 1995Go; Rosen et al., 1999Go). Many investigations have proposed that amyloplast sedimentation in the columella cells is the primary mechanism for gravity sensing. Recent analyses using starch-deficient mutants of Arabidopsis and unique experiments of flax using high-gradient magnetic fields also indicate that amyloplasts are important for the induction of root curvature (Kiss et al., 1997Go; Kuznetsov and Hasenstein, 1996Go). Blancaflor et al. showed that the central cells of storey 2 in the columella cells contributed the most to root gravitropism using laser ablation (Blancaflor et al., 1998Go).

On the other hand, the signalling pathway from gravity sensing to physical change of cell elongation is still unclear. Ca2+ and a Ca2+ gradient are probably involved, and calmodulin may play an important role in its transduction to a local auxin release (Masson, 1995Go; Sinclair et al., 1996Go). As a result, auxin redistribution at the root tip and asymmetric distribution in the elongation zone are thought to be the major signalling pathways in root gravitropism. However, there is no distinct evidence that auxin transport and auxin distribution across the elongation zone are necessary for root gravitropism in vivo (Marchant et al., 1999Go).

To determine the signalling pathway within the root apex, it is useful to block the function of cell(s) but not physically to break these cells in order to clarify the cell-to-cell interactions. Cell ablation (Day and Irish, 1997Go) and UV laser (van den Berg et al., 1995Go, 1997Go) techniques are powerful tools for understanding the fate and function of cells in an organ, but it is difficult to inactivate a specified tissue or a certain group of cells without disruption using these techniques.

It is well known that ionizing radiation causes cell inactivation as a result of DNA damage, without causing significant damage to the cytoplasm, cell membrane and so on. Heavy ions have a high relative biological effectiveness (RBE) by means of efficiently producing DNA double strand breaks and irreparable DNA damage (reviewed by Blakely, 1992Go; Lett, 1992Go). Also in plants, the high efficiency of lethality (Tanaka et al., 1997Go), chromosome aberration (Hase et al., 1999Go) and mutations (Shikazono et al., 1998Go, 2001Go) has been shown. Recently, a high-energy microbeam apparatus was constructed to investigate the effect of local irradiation of heavy ions on biological systems (Kobayashi et al., 2000Go).

In this study, microbeam irradiation was first used for botanical research with Arabidopsis plants, and the positional effects of cell inactivation caused by microbeams on root gravitropism was analysed.


    Materials and methods
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
Plant material and growth condition
Seedlings of Arabidopsis thaliana (L.) Heynh. ecotype Columbia were used in this study. Seeds were surface-sterilized using 70% ethanol for 1 min and 5% bleach/0.05% Tween 20 for 10 min, and then rinsing in sterile, distilled water. The seeds were planted on a nutritive agar plate (0.1% Hyponex, 1.5% agar) and vertically incubated for 3 d under fluorescent lights (c. 25 µmol m-2 s-1) at 23 °C.

For microbeam irradiation, 6–8 uniformly-grown plants were carefully chosen from 30–40 plants incubated and were put on a micro slide glass (76x26 mm), then they were dripped with a few drops of nutrient-sterile water (0.1% Hyponex). Roots and hypocotyls were covered with a small piece of microwave wrap (Saran wrap, Asahi Chemical Co. Ltd, c. 50x20 mm) to prevent drying of the seedlings.

Microbeam irradiation
The heavy-ion microbeam used in this study has been described previously (Kobayashi et al., 1997Go). In this study, 220 MeV C5+ ions were used for microbeam irradiation. The physical properties of 220 MeV C5+ ions are as follows: incident energy is 18.3 MeV/u, linear energy transfer (LET) in a root is 110 keV/µm as water equivalent, and the range of ions is c. 1.0 mm. Before irradiation, the laser beam which is installed upstream of the collimators, is used for the establishment of the irradiation position. Plants on the glass plate were positioned by micropositioning the X–Y stage, and then irradiated. The intensity and the energy of the ion beams on the target micropositioning stage or after the beam has penetrated the target are measured with a plastic scintillator, CR-39 track detector and solid-state detector (SSD) in the air. During irradiation, the target can be observed with an optical microscope system.

Measurement of growth and curvature
After irradiation, irradiated plants were removed from the glass plate and incubated vertically on a fresh nutrient agar-containing plastic plate. For a mock control, seedlings grown on the same plate were also transferred to fresh medium without microbeam irradiation. In order to measure the horizontal and vertical length of root elongation after irradiation and gravistimulation, plotting paper (10x5 mm) was put on top of each root and the position of the root-tip end was checked. Then, irradiated plants were gravistimulated by rotating 90° from the vertical for another 3 d in the dark to prevent phototropic effects. The horizontal length and vertical length of root elongation were measured under an optical microscope with a micrometer eyepiece. Root curvature in degrees were calculated as tan-1 (vertical length/horizontal length).


    Results
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
The root apical tissues were irradiated with 220 MeV carbon-ion beams with diameters of 40, 120 and 250 µm, and then gravistimulated by incubation with a 90° rotation (Fig. 1Go). Root apical tissues including the distal elongation zone (i.e. the sites of gravitropic perception and signalling) were irradiated with carbon ions in a 250 µm diameter beam to determine the dose needed to inactivate these cells (Figs 1AGo, 2Go). Root growth was completely inhibited by a dose of 100 Gy. The dose–response curve of vertical root elongation showed a small shoulder up to about 10 Gy, followed by an exponential decrease until 75 Gy. On the other hand, the dose–response curve of the horizontal root elongation has a shoulder at around 30 Gy and an exponential decrease until 100 Gy. Thus, the effect of ion beams on gravistimulated root growth was more effective on vertical elongation than horizontal elongation. It is concluded that 75 Gy is a suitable dose for detecting sites that are sensitive to gravitropism.



View larger version (23K):
[in this window]
[in a new window]
 
Fig. 1.  Irradiation positions used in this study. Vertically grown Arabidopsis primary roots were irradiated by microbeams with diameters of 250 µm (A), 120 µm (B) and 40 µm (C). After irradiation, plants were gravistimulated by rotation at 90° from the vertical and incubated in the dark. EZ, elongation zone; M, meristematic; RC, root cap; ME, main elongation zone; DE, distal elongation zone; QC, quiescent centre; C, columella.

 


View larger version (20K):
[in this window]
[in a new window]
 
Fig. 2.  Dose–response curves of vertical and horizontal root elongation after microbeam irradiation. Apical root tissues were irradiated with a 250 µm diameter beam (Fig. 1AGo), then gravistimulated by rotation at 90° and incubated in the dark. Data (±SE) are the average of 6–9 plants (see Materials and methods).

 
Figure 3Go and Table 1Go show typical results of the effect of irradiation with a 120 µm diameter microbeam. Irradiation at position a (Fig. 1BGo), which was in the root tip, strongly inhibited root elongation and curvature. Root elongation and curvature were weakly inhibited by irradiation at position d (which becomes the upper part of the root cap and columella cells after gravistimulation), whereas they were strongly inhibited by irradiation at position b (which becomes the lower part after gravistimulation). Irradiation of position c often resulted in upward root curvature (negative gravitropism) after gravistimulation. Out of a total of 30 plants, nine showed negative gravitropism. On the other hand, irradiation at position e, which is thought to be in the distal elongation (DE) zone, or at position f, which is thought to be in the main elongation (ME) zone, had hardly any effect on either root elongation or curvature (Fig. 3Go).



View larger version (73K):
[in this window]
[in a new window]
 
Fig. 3.  Root bending after irradiation with a 120 µm diameter microbeam. Alphabets indicate the irradiation positions drawn in Fig. 1BGo. Bar indicates 200 µm.

 

View this table:
[in this window]
[in a new window]
 
Table 1.  Growth rates and curvature of Arabidopsis root (I)

Values represent mean±SE of two independent experiments (n>=12).

 
To identify more accurately the site that is responsive for gravitropism, an additional experiment was conducted with a finer (40 µm diameter) microbeam. The position of the beam is shown in Fig. 1CGo and the results are shown in Table 2Go. As was found with the 120 µm diameter beam, the position that showed the greatest sensitivity to irradiation with respect to vertical elongation and curvature was position {alpha} at the tip of the root. However, negative gravitropism was not observed in the case of the 40 µm diameter irradiation. On the other hand, vertical elongation and curvature were severely inhibited by irradiation at position ß, and moderately inhibited by irradiation at position {varepsilon}. Irradiation at position {gamma} had no effect. Irradiation at position {delta}, that becomes the upper site after gravistimulation, had a small effect compared with that at position ß. One of the central sites, position {chi}, although it contains most of the columella and meristem cells, is less sensitive than position ß, which becomes the lower side after gravistimulation.


View this table:
[in this window]
[in a new window]
 
Table 2.  Growth rates and curvature of Arabidopsis root (II)

Values represent the mean±SE of results from between 8 and 14 plants.

 


    Discussion
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
Of the areas tested, the root tip was the most sensitive to microbeams with respect to both root growth and curvature after gravistimulation. Several investigations have shown that columella cells have a role in root gravity sensing because they contain amyloplasts, which are the primary machinery for the perception of gravity. This study showed that the root tip area, especially the a or {alpha} position in Fig. 2Go, is the most sensitive area for root curvature. The a or {alpha} position consists of root cap cells and outer columella cells. Blancaflor et al. showed by means of the laser ablation technique that ablation of root cap and tip cells did not alter root curvature, but ablation of the two innermost columella stories (storeys 1 and 2) caused the strongest inhibitory effect without affecting root growth rates (Blancaflor et al., 1998Go). These differences from data of this study are likely to be as a result of the number of different cell types being affected in this study whereas specific cell types were ablated in the Blancaflor et al. study. This concern is highlighted by the results presented in Tables 1Go and 2Go where considerably greater effects were seen in roots treated with 120 µm beams compared to the 40 µm beams, such as position a versus position {alpha}. It is plausible that the columella is the most sensitive, and therefore, important tissue for graviresponsiveness, but a number of additional cell types might also be strongly related to root gravitropism.

After the tip cells, cells that become the lower side after gravistimulation, such as the cells in the b position in Fig. 1BGo, were the next most sensitive site for root gravitropism. Among this latter group of cells, irradiation of the lower part of the quiescent centre and innermost columella cells (the ß position in Fig. 1CGo) caused the strongest inhibition, whereas irradiation of the opposite site ({delta} position) caused little effect. This result suggests that there is some signalling from the tip cells to the elongation zone, and that the signal transduction occurs in the lower part of the root apical tissues. Auxin redistribution at the tip cells and asymmetric distribution in the elongation zone are believed to be a main signalling pathway, but it is still unknown how the graviperception signal is transduced and transported to the elongation zone (reviewed by Rosen et al., 1999Go). Based on the present results, it is possible to hypothesize that auxin or another signal is transported from the root tip to the elongation zone through cells on the lower side after gravistimulation, to become accumulated in the elongation zone and inhibiting cell elongation at the lower side leading to root bending. However further work is required to confirm this hypothesis.

Negative gravitropism was caused by irradiating region c in Fig. 1BGo. The c position includes the a position, but irradiation of the a position only inhibited root gravitropism, whereas irradiation of the c position caused upward bending of the root. The root bending mechanism may have been disrupted because irradiating the c position with a 120 µm diameter ion beam damaged not only gravity perception (in the a position) but also signalling in adjacent cells. Therefore, irradiation of only a part of the c position with a 40 µm diameter microbeam would not result in negative gravitropism.

As the predominant effect of ionizing radiation on the cell is DNA damage, dividing cells are more sensitive to microbeams than non-dividing cells. However, the meristem regions such as the {chi} or {phi} positions in Fig. 1CGo do not seem to be more sensitive to ionizing radiation than the other regions. The most sensitive regions are the root tip cells and the cells that become the lower part after gravistimulation, such as the cells in the {alpha}, ß and {varepsilon} positions in Fig. 1CGo. These cells were not undergoing cell division during the present experiments. Thus, the root meristem is not important for root gravity sensing.


    Acknowledgments
 
We thank Professor Shigemitsu Tano, Dr Yutaka Oono, Dr Naoya Shikazono, and Dr Ayako Sakamoto for their helpful comments and discussions. We are also grateful to the staff of the Takasaki Ion Accelerators for Advanced Radiation Application (TIARA) of the Japan Atomic Energy Research Institute (JAERI) for their assistance with the heavy-ion microbeam irradiation.


    Notes
 
1 To whom correspondence should be addressed. Fax: +8127346-9688. E-mail: atanaka{at}taka.jaeri.go.jp Back


    References
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 References
 
Blakely EA. 1992. Cell inactivation by heavy charged particles. Radiation and Environmental Biophysics 31, 181–196.[Web of Science][Medline]

Blancaflor EB, Fasano JM, Gilroy S. 1998. Mapping the functional roles of cap cells in the response of Arabidopsis primary roots to gravity. Plant Physiology 116, 213–222.[Abstract/Free Full Text]

Day CD, Irish VF. 1997. Cell ablation and the analysis of plant development. Trends in Plant Science 2, 106–111.

Hase Y, Shimono K, Inoue M, Tanaka A, Watanabe H. 1999. Biological effects of ion beams in Nicotiana tabacum L. Radiation and Environmental Biophysics 38, 111–115.[Web of Science][Medline]

Kiss JZ, Guisinger MM, Miller AJ, Stackhouse KS. 1997. Reduced gravitropism in hypocotyls of starch-deficient mutants of Arabidopsis. Plant and Cell Physiology 38, 518–525.[Abstract/Free Full Text]

Kobayashi Y, Taguchi M, Okumura S, Watanabe H. 1997. Microbeam system for local irradiation of biological systems. JAERI-Review (TIAARA Annual Report 1996) 96–017, 38–40.

Kobayashi Y, Taguchi, Watanabe H. 2000. Use of a collimated heavy-ion microbeam for irradiating cells individually. Radiation Research 153, Extended Abstracts, 228–229.

Kuznetsov OA, Hasenstein KH. 1996. Intracellular magnetophoresis of amyloplasts and induction of root curvature. Planta 198, 87–94.[Web of Science][Medline]

Lett JT. 1992. Damage to cellular DNA from particulate radiations, the efficacy of its processing and the radiosensitivity of mammalian cells. Radiation and Environmental Biophysics 31, 257–277.[Web of Science][Medline]

Marchant A, Kargul J, May ST, Muller P, Delbarre A, Perrot-Rechenmann C, Bennett MJ. 1999. AUX1 regulates root gravitropism in Arabidopsis by facilitating auxin uptake within root apical tissues. EMBO Journal 18, 2066–2073.[Web of Science][Medline]

Masson PH. 1995. Root gravitropism. Bioessays 17, 119–127.[Web of Science][Medline]

Rosen E, Chen R, Masson PH. 1999. Root gravitropism: a complex response to a simple stimulus? Trends in Plant Science 4, 407–412.[Web of Science][Medline]

Shikazono N, Yokota Y, Tanaka A, Watanabe H, Tano S. 1998. Molecular analysis of carbon ion-induced mutations in Arabidopsis thaliana. Genes and Genetic Systems 73, 173–179.

Shikazono N, Tanaka A, Watanabe H, Tano S. 2001. Rearrangements of the DNA in carbon ion-induced mutants of Arabidopsis thaliana. Genetics 157, 379–387.[Abstract/Free Full Text]

Sinclair W, Oliver I, Maher P, Trewavas A. 1996. The role of calmodulin in the gravitropic response of the Arabidopsis thaliana agr-3 mutant. Planta 199, 343–351.[Web of Science][Medline]

Tanaka A, Shikazono N, Yokota Y, Watanabe H, Tano S. 1997. Effect of heavy ions on the germination and survival of Arabidopsis thaliana. International Journal of Radiation Biology 72, 121–127.[Web of Science][Medline]

van den Berg C, Willemsen V, Hendriks G, Weisbeek P, Scheres B. 1997. Short-range control of cell differentiation in the Arabidopsis root meristem. Nature 390, 287–289.[Medline]

van den Berg C, Willemsen V, Hage W, Weisbeek P, Scheres B. 1995. Cell fate in the Arabidopsis root meristem determined by directional signalling. Nature 378, 62–65.[Medline]


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
Plant Physiol.Home page
E. B. Blancaflor and P. H. Masson
Plant Gravitropism. Unraveling the Ups and Downs of a Complex Process
Plant Physiology, December 1, 2003; 133(4): 1677 - 1690.
[Full Text] [PDF]


Home page
Plant Physiol.Home page
M. Geisler, B. Jablonska, and P. S. Springer
Enhancer Trap Expression Patterns Provide a Novel Teaching Resource
Plant Physiology, December 1, 2002; 130(4): 1747 - 1753.
[Abstract] [Full Text] [PDF]


This Article
Right arrow Abstract Freely available
Right arrow FREE Full Text (PDF) Freely available
Right arrow E-letters: Submit a response
Right arrow Alert me when this article is cited
Right arrow Alert me when E-letters are posted
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (9)
Right arrowRequest Permissions
Right arrow Disclaimer
Google Scholar
Right arrow Articles by Tanaka, A.
Right arrow Articles by Watanabe, H.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Tanaka, A.
Right arrow Articles by Watanabe, H.
Agricola
Right arrow Articles by Tanaka, A.
Right arrow Articles by Watanabe, H.
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?