Journal of Experimental Botany, Vol. 53, No. 370, pp. 801-808,
April 15, 2002
© 2002 Oxford University Press
Original Papers |
What stay-green mutants tell us about nitrogen remobilization in leaf senescence
Institute of Grassland and Environmental Research, Plas Gogerddan, Aberystwyth, Ceredigion SY23 3EB, UK
Received 18 July 2001; Accepted 8 October 2001
| Abstract |
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Leaf senescence has an important role in the plant's nitrogen economy. Chlorophyll catabolism is a visible symptom of protein mobilization. Genetic and environmental factors that interfere with yellowing tend to modify protein degradation as well. The chlorophyllprotein relationship is much closer for membrane proteins than it is for soluble or total leaf proteins. In stay-greens, genotypes with a specific defect in the chlorophyll catabolism pathway, soluble protein degradation during senescence may be close to normal, but light-harvesting and reaction centre thylakoid membrane proteins are much more stable. Genes for the chlorophyll catabolism pathway and its control are important in the regulation of protein mobilization. Genes for three steps in the pathway are reported to have been isolated. The gene responsible for the stay-green phenotype in grasses and legumes has not yet been cloned but a fair amount is known about it. Pigment metabolism in senescing leaves of the FestucaLolium stay-green mutant is clearly disturbed and is consistent with a blockage at the ring-opening (PaO) step in chlorophyll breakdown. PaO is de novo synthesized in senescence and thought to be the key enzyme in the chlorophyll a catabolic pathway. The stay-green mutation is likely to be located in the PaO gene, or a specific regulator of it. These genes may well be in the various senescence-enhanced cDNA collections that have been generated, but functional handles on them are currently lacking. When the stay-green locus from Festuca pratensis was introgressed into Lolium temulentum, a gene encoding F. pratensis UDPG-pyrophosphorylase was shown to have been transferred on the same chromosome segment. A strategy is described for cloning the stay-green gene, based on subtractive PCR-based analyses of intergeneric introgressions and map-based cloning.
Key words: Alien introgression, cDNA, chlorophyll catabolism, Festuca, Lolium, species-specific polymorphism, UDP-glucose pyrophosphorylase.
| Introduction |
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Leaf senescence has an important role in the plant's nitrogen economy (Feller and Fischer, 1994
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Most of the mobilizable protein in a leaf is soluble. Chlorophyll, on the other hand, is strictly confined to plastid membranes. The chlorophyllprotein relationship is much closer for membrane proteins than it is for soluble or total leaf proteins. If chlorophyll breakdown in senescence is prevented, soluble and membrane proteins diverge in their breakdown pattern. Figure 2
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The pigment proteolipids of thylakoids have both a photosynthetic function and a role in membrane structure (Allen and Forsberg, 2001
In the network of processes that regulate protein mobilization in senescence (Thomas and Donnison, 2000
; Dangl et al., 2000
), the induction of chlorophyll degradation is an early and, for membrane polypeptides, essential event. Genes for the chlorophyll pathway and its control are therefore important in the regulation of protein mobilization. Chlorophyll catabolism is summarized in Fig. 3
. The genes for three steps in the pathway have been clonedchlorophyllase (Jakob-Wilk et al., 1999
; Tsuchiya et al., 1999
), RCC reductase (Wüthrich et al., 2000
) and the ABC-type tonoplast transporter (Lu et al., 1998
; Tommasini et al., 1998
). Mach et al. cloned the ACD2 locus of Arabidopsis and found it to be identical with RCC reductase (Mach et al., 2001
). The knockout has an accelerated cell death phenotype, taking the form of light-dependent spreading lesions, with no evidence of stay-green-type behaviour. The gene responsible for the non-yellowing phenotype in grasses and legumes has not yet been cloned but a fair amount is known about it. The rest of this paper will review the gene in FestucaLolium and will describe approaches to isolating it.
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| Stay-green Festuca pratensis |
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The non-yellowing trait in Festuca pratensis was shown to be inherited as a simple Mendelian recessive (Thomas, 1987
Special attributes of reproduction and genome organization in the two genera make species from the LoliumFestuca complex particularly convenient subjects for introgression analysis. Introgression substitutes a gene by its homeologue from an alien background, allowing the locus to be identified, analysed and, ultimately, isolated. Species across the range of Lolium and Festuca are interfertile and homeologous chromosomes often pair and recombine freely (Canter et al., 1999
). Recombination between Festuca and Lolium species is generally promiscuous, with rates of gene substitution reaching more than 70% in some crosses. DNA introgressed by interspecific or intergeneric hybridization in Lolium/Festuca is detectable by genomic in situ hybridization (GISH; Thomas et al., 1994
) and by species-specific molecular markers (King et al., 1998
). Lines of Lolium temulentum have been produced with and without the stay-green introgression from Festuca pratensis (Thomas et al., 1999
).
| Chlorophyll metabolism in stay-green Festuca/Lolium |
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Pigment metabolism in senescing leaves of Festuca and Lolium plants homozygous for the stay-green mutation is clearly disturbed. Chlorophyll a and total carotenoid levels are more or less stable during senescence, but chlorophyll b is almost as labile as it is in the wild type (Fig. 4
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Protein synthesis inhibitors prevent yellowing in senescing wild-type leaves. They also stop the pigment changes occurring in the stay-green mutant (Fig. 4
| Genes expressed in stay-green Festuca/Lolium |
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Over recent years, differential and subtractive cloning has resulted in the isolation of large numbers of genes with senescence-enhanced expression patterns from a range of species (Buchanan-Wollaston, 1997
As well as promiscuous alien recombination, there is a further experimental benefit of Lolium and Festuca for genetic analysis: a high degree of molecular polymorphism between the species and genera. This is reflected not only in genomic sequences at given loci, but also in expressed genes. Expressed genes carried on an introgressed segment can be identified as species-specific polymorphisms in corresponding cDNAs. An example is UDP-glucose pyrophosphorylase (UDPGP). The stay-green gene from F. pratensis was transferred to L. temulentum Ceres and the alien segment reduced by several backcrosses (Thomas et al., 1999
). Figure 5a
shows that the small introgressed segment carrying the F. pratensis stay-green gene is located at the extreme end of one of the L. temulentum chromosomes. Genes expressed in wild-type and stay-green Ceres were compared by cDNA-RDA. Several differentially expressed genes were identified (Thomas et al., 1997
) including one which, when sequenced, showed a good match to barley UDPGP (Fig. 5b
, c). The same gene cloned independently from several stay-green and wild-type individuals showed distinctive phenotype-specific single nucleotide polymorphisms. In each of the sequences from F. pratensis (wild type or stay-green) and from stay-green L. temulentum, the nucleotides at positions 160, 450 and 458 are A, C and T, respectively. At the same positions in all sequences from wild-type L. temulentum G, T and G occur. Thus the UDPGP gene of L. temulentum plants carrying the single F. pratensis segment (Fig. 5a
) is clearly a Festuca gene. It means that UDPGP is a gene linked closely to stay-green that has travelled all the way to L. temulentum Ceres on the same F. pratensis-derived alien segment. Other genes of similar origin will undoubtedly be identified within the collections of stay-green or wild-type-specific polymorphic fragments isolated by cDNA-AFLP (Table 1
) and by cDNA-RDA (Thomas et al., 1997
). For the purpose of seeking transcripts corresponding to the stay-green locus, introgression limits the numbers of candidates to those genes located on a small alien segment. Systematic functional testing, including complementation in transgenic LoliumFestuca, thus becomes feasible. At the very least this approach generates several polymorphic markers close to the stay-green locus. Applied to a large-insert genomic library from F. pratensis (I Donnison and I King, unpublished results) together with genomic tags such as AFLPs and microsatellites, these open up the prospect of gene isolation by chromosome landing.
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| Conclusion |
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The stay-green gene from Festuca pratensis, and similar (homologous?) genes from other species including Pisum sativum (Thomas et al., 1996
| Acknowledgments |
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We are grateful to Barbara Hauck, Caron James, Ann Thomas, John Harper, and Gareth Morgan for their contributions to the work described here, and to Neil Jones for making Peter Canter's participation possible. The Institute of Grassland and Environmental Research is sponsored by the UK Biotechnology and Biological Sciences Research Council.
| Notes |
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1 To whom correspondence should be addressed. Fax: +44 (0)1970 823242. E-mail: sid.thomas{at}bbsrc.ac.uk
| References |
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|
|
|---|
Allen JF, Forsberg J. 2001. Molecular recognition in thylakoid structure and function. Trends in Plant Science 6, 317326.[Web of Science][Medline]
Bachmann A, Fernandez-Lopez J, Ginsburg S, Thomas H, Bouwkamp JC, Solomos T, Matile P. 1994. Stay-green genotypes of Phaseolus vulgaris L.chloroplast proteins and chlorophyll catabolites during foliar senescence. New Phytologist 126, 593600.
Buchanan-Wollaston V. 1997. The molecular biology of leaf senescence. Journal of Experimental Botany 48, 181199.
Canter PH, Pasakinskiene I, Jones RN, Humphreys MW. 1999. Chromosome substitutions and recombination in the amphiploid Lolium perennexFestuca pratensis cv. Prior (2n=4x=28). Theoretical and Applied Genetics 98, 809814.
Dalton SJ, Bettany AJE, Timms EJ, Morris P. 1999. Co-transformed, diploid Lolium perenne (perennial ryegrass), Lolium multiflorum (Italian ryegrass) and Lolium temulentum (Darnel) plants produced by microprojectile bombardment. Plant Cell Reports 18, 721726.
Dangl JL, Dietrich RA, Thomas H. 2000. Senescence and programmed cell death. In: Buchanan B, Gruissem W, Jones R, eds. Biochemistry and molecular biology of plants. Rockville: ASPP, 10441100.
Davies TGE, Thomas H, Rogers LJ. 1990a. Immunological quantification of cytochrome f in leaves of a non-yellowing senescence mutant of Festuca pratensis. Photosynthesis Research 24, 99108.
Davies TGE, Thomas H, Thomas BJ, Rogers LJ. 1990b. Leaf senescence in a non-yellowing mutant of Festuca pratensis: metabolism of cytochrome f. Plant Physiology 93, 588595.
Feller U, Fischer A. 1994. Nitrogen metabolism in senescing leaves. Critical Reviews in Plant Science 13, 241273.
Hauck B, Gay AP, Macduff J, Griffiths CM, Thomas H. 1997. Leaf senescence in a non-yellowing mutant of Festuca pratensis: implications of the stay-green mutation for photosynthesis, growth and nitrogen nutrition. Plant Cell and Environment 20, 10071018.
Hilditch P, Thomas H, Thomas BJ, Rogers LJ. 1989. Leaf senescence in a non-yellowing mutant of Festuca pratensis: proteins of Photosystem II. Planta 177, 265272.[Web of Science]
Hörtensteiner S, Vicentini F, Matile P. 1995. Chlorophyll breakdown in senescent cotyledons of rape, Brassica napus L.: enzymatic cleavage of phaeophorbide a in vitro. New Phytologist 129, 237246.
Jakob-Wilk D, Holland D, Goldschmidt EE, Riov J, Eyal Y. 1999. Chlorophyll breakdown by chlorophyllase: isolation and functional expression of the Chlase 1 gene from ethylene-treated Citrus fruit and its regulation during development. The Plant Journal 20, 653661.[Web of Science][Medline]
King IP, Morgan WG, Armstead IP, Harper JA, Hayward MD, Bollard A, Nash JV, Forster JW, Thomas HM. 1998. Introgression mapping in the grasses. I. Introgression of Festuca pratensis chromosomes and chromosome segments into Lolium perenne. Heredity 81, 462467.
Langmeier M, Ginsburg S, Matile P. 1993. Chlorophyll breakdown in senescent leaves: demonstration of Mg-dechelatase activity. Physiologia Plantarum 89, 347353.
Lu Y-P, Li Z-S, Drozdowicz Y-M, Hörtensteiner S, Martinoia E, Rea PA. 1998. AtMRP2, an Arabidopsis ATP binding cassette transporter able to transport glutathione S-conjugates and chlorophyll catabolites: functional comparisons with AtMRP1. The Plant Cell 10, 267282.
Mach JM, Castillo A, Hoogstraten R, Greenberg JT. 2001. The Arabidopsis accelerated cell death gene ACD encodes red chlorophyll catabolite reductase and suppresses the spread of disease symptoms. Proceedings of the National Academy of Sciences, USA 98, 771776.
Matile P, Hörtensteiner S, Thomas H. 1999. Chlorophyll degradation. Annual Review of Plant Physiology and Plant Molecular Biology 50, 6795.[Web of Science]
Nock LP, Rogers LJ, Thomas H. 1992. Metabolism of protein and chlorophyll in leaf tissue of Festuca pratensis Huds. during chloroplast assembly and senescence. Phytochemistry 31, 14651470.
Rodoni S, Schellenberg M, Matile P. 1998. Chlorophyll breakdown in senescing barley leaves as correlated with pheophorbide a oxygenase activity. Journal of Plant Physiology 152, 139144.
Ronning CM, Bouwkamp JC, Solomos T. 1991. Observations on the senescence of a mutant non-yellowing genotype of Phaseolus vulgaris L. Journal of Experimental Botany 42, 235241.
Scheumann V, Schoch S, Rüdiger W. 1999. Chlorophyll b reduction during senescence of barley seedlings. Planta 209, 364370.[Web of Science][Medline]
Thomas H. 1977. Ultrastructure, polypeptide composition and photochemical activity of chloroplasts during foliar senescence of a non-yellowing mutant genotype of Festuca pratensis Huds. Planta 137, 5360.[Web of Science]
Thomas H. 1987. Sid: a Mendelian locus controlling thylakoid membrane disassembly in senescing leaves of Festuca pratensis. Theoretical and Applied Genetics 73, 551555.
Thomas H. 1997. Chlorophyll: a symptom and a regulator of plastid development. New Phytologist 136, 163181.
Thomas H, Bortlik K, Rentsch D, Schellenberg M, Matile P. 1989. Catabolism of chlorophyll in vivo: significance of polar chlorophyll catabolites in a non-yellowing senescence mutant of Festuca pratensis. New Phytologist 111, 38.[Web of Science]
Thomas H, Donnison I. 2000. Back from the brink: plant senescence and its reversibility. In: Bryant J, Hughes SG, Garland JM, eds. Programmed cell death in animals and plants. Oxford: Bios, 149162.
Thomas H, Evans C, Thomas HM, Humphreys MW, Morgan WG, Hauck B, Donnison I. 1997. Introgression, tagging and expression of a leaf senescence gene in Festulolium. New Phytologist 137, 2934.
Thomas H, Howarth CJ. 2000. Five ways to stay green. Journal of Experimental Botany 51, 329337.
Thomas H, Morgan WG, Thomas AM, Ougham HJ. 1999. Expression of the stay-green character introgressed into Lolium temulentum Ceres from a senescence mutant of Festuca pratensis. Theoretical and Applied Genetics 99, 9299.
Thomas H, Schellenberg M, Vicentini F, Matile P. 1996. Gregor Mendel's green and yellow pea seeds. Botanica Acta 109, 34.[Web of Science]
Thomas HM, Morgan WG, Meredith MR, Humphreys MW, Thomas H, Leggett JM. 1994. Identification of parental and recombined chromosomes of Lolium multiflorumxFestuca pratensis by genomic in situ hybridization. Theoretical and Applied Genetics 88, 909913.
Tommasini R, Vogt E, Fromenteau M, Hörtensteiner S, Matile P, Amrhein N, Martinoia E. 1998. An ABC transporter of Arabidopsis thaliana has both glutathione-conjugate and chlorophyll catabolite transport activity. The Plant Journal 13, 773780.[Web of Science][Medline]
Tsuchiya T, Ohta H, Okawa K, Iwamatsu A, Shimada H, Masuda T, Takamiya K. 1999. Cloning of chlorophyllase, the key enzyme in chlorophyll degradation: finding of a lipase motif and the induction by methyl jasmonate. Proceedings of the National Academy of Sciences, USA 96, 1536215367.
Vicentini F, Hörtensteiner S, Schellenberg M, Thomas H, Matile P. 1995. Chlorophyll breakdown in senescent leaves: identification of the biochemical lesion in a stay-green genotype of Festuca pratensis Huds. New Phytologist 129, 247252.[Web of Science]
Wüthrich KL, Bovet L, Hunziker PE, Donnison IS, Hörtensteiner S. 2000. Molecular cloning, functional expression and characterisation of RCC reductase involved in chlorophyll catabolism. The Plant Journal 21, 189198.[Web of Science][Medline]
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) and of a stay-green introgression line (). The data comprise observations from four independent experiments and fitted regression lines and equations are shown.


) Controls; (
) treated with the inactive L-stereoisomer of MDMP; (



