JXB Advance Access originally published online on November 15, 2004
Journal of Experimental Botany 2005 56(412):515-523; doi:10.1093/jxb/eri029
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RESEARCH PAPER |
Differential response of PCNA and Cdk-A proteins and associated kinase activities to benzyladenine and abscisic acid during maize seed germination
1Departamento de Bioquímica, Facultad de Química, UNAM, México D.F. 04510, México
2Department of Vegetable Crops, One Shields Ave, University of California, Davis, CA 95616-8631, USA
* To whom correspondence should be addressed. Fax: +52 56225284; E-mail: jorman{at}servidor.unam.mx
Received 20 August 2004; Accepted 14 September 2004
| Abstract |
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The proliferating cell nuclear antigen (PCNA) is a protein factor required for processive DNA synthesis that is associated with G1 cell cycle proteins. It has been demonstrated previously that, in germinating maize (Zea mays) embryonic axes, PCNA forms protein complexes with two Cdk-A proteins (32 and 36 kDa) and with a putative D-type cyclin. These complexes exhibit protein kinase activity on histone H1 and on the maize homologue of the pRB (retinoblastoma) protein. Flow cytometry has been used to study the influence of the phytohormones benzyladenine (BA) and abscisic acid (ABA) on cell cycle advancement during maize germination. It was found that, while BA accelerates the passage of cells from G1 to G2, ABA delays cell cycle events so that most cells seem to remain in G1. The amounts of PCNA and Cdk-A proteins also vary according to the hormone treatment. In embryonic axes, PCNA increases rapidly during early germination in BA, compared with a gradual increase in water, while ABA treatment had only a marginal effect. However, of the two Cdk-A proteins, the 32 kDa protein is strongly reduced after 15 h of imbibition in water while this occurs later when axes are imbibed in BA or ABA. The PCNA-associated protein kinase activity in the BA and ABA treatments falls after 3 h of imbibition compared with activity in the control; however, while kinase activity in the BA treatment continues to decline during imbibition, it remains relatively constant until 24 h of imbibition in the ABA treatment. By contrast, a p13Suc1-associated Cdk-A kinase is activated after 15 h of imbibition under all treatments, particularly in ABA. These results suggest that, in maize, ABA delays the germination process by affecting cell cycle advancement, stopping cells mostly in a G1 state.
Key words: Cdks, cell cycle, germination, PCNA, phytohormones, Zea mays L
| Introduction |
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Seed germination is a developmental process of reactivation of metabolism to originate a new plant. This process starts with seed imbibition and ends with the protrusion of the embryonic axis (normally the radicle) through the enclosing tissues (Bewley and Black, 1994
In mammals, progress through the cell cycle is regulated by distinct families of cyclin-dependent kinases (Cdks) whose activities are co-ordinated by different types of cyclins. These basic mechanisms of cell cycle control are conserved in plant cells (Mironov et al., 1999
). Several genes coding for Cdk proteins from maize, rice, alfalfa, soybean, pea, tobacco, and Arabidopsis have been reported (Colasanti et al., 1991
; Ferreira et al., 1991
; Hashimoto et al., 1992
; Hirt et al., 1993
; Miao et al., 1993
; Fober et al., 1994
; Setiady et al., 1996
) and these have been divided into two main families, Cdk-A and Cdk-B. Cdk-B function is important in the G2/M phase, whereas Cdk-A participates in both the G1/S and the G2/M transitions. Cdk-A protein is the homologue of mammalian Cdk1 and contains the characteristic PSTAIRE amino acid motif in the cyclin-binding domain that defines Cdc2-type kinases (Mironov et al., 1999
; Joubés et al., 2000
). In tobacco and Arabidopsis cells, Cdk-A is activated by cyclin D-type proteins and this protein complex is able to phosphorylate the plant homologue of the retinoblastoma protein (pRB) (Nakagami et al., 1999
) and also histone H1 (Healy et al., 2001
). These results and the isolation of homologues of the E2F transcription factors from wheat, tobacco, carrot, and Arabidopsis (Ramírez-Parra et al., 1999
; Sekine et al., 1999
; Albani et al., 2000
; Magyar et al., 2000
) indicate that the entry of cells into the G1 phase in plants is controlled by cyclin DCdk-A-type complexes and that these are able to inactivate the growth-suppressing activity of pRb (Gutierrez et al., 2002
).
In maize two different types (32 kDa and 36 kDa) of Cdk-A were found. Both proteins form complexes with the proliferating cell nuclear antigen (PCNA) protein (Sánchez et al., 2002
). PCNA protein is the sliding clamp of the replicative DNA polymerase
(Tan et al., 1986
; Prelich et al., 1987
; Shivji et al., 1992
); however, during the G1 phase in higher eukaryotes, PCNA has been found associated with other cell cycle proteins like Cdk4, cyclin D, and p21 (Xiong et al., 1992
). During maize germination, PCNA not only associates with Cdk-A proteins, but also with a putative cyclin D (Herrera et al., 2000
). This PCNA-associated protein complex exhibits kinase activity that is able to phosphorylate both histone H1 and the maize pRB-related protein (ZmRBR) (Sánchez et al., 2002
). Moreover, PCNA-associated kinase activity is higher during the early hours of germination (06 h) than later (1524 h) when the S phase begins, suggesting that it is a G1 phase kinase. Interestingly, in in vitro assays, the fission yeast Cdk-binding protein p13Suc1, which is active during the G2 phase in yeast cells (Hayles et al., 1986
), binds with the maize Cdk-A protein from maize protein extracts. Moreover, the protein complex formed shows kinase activity preferentially with Cdk-A obtained from germinating seeds (by 15 h and onward), in contrast to the PCNA-associated kinase (Sánchez et al., 2002
).
Plant hormones play essential roles in plant metabolism and can influence cell cycle proteins. Cytokinins stimulate Cdk-A activity in the G2/M phases (Zhang et al., 1996
) and, at the G1/S transition, regulate cell cycle progression partly by inducing CycD3,1 transcription (Meijer and Murray, 2001
). During maize germination, benzyladenine (BA), a synthetic cytokinin, accelerates the germination process, affecting the amounts of G1/S cell cycle proteins like PCNA and a putative cyclin D (Cruz-García et al., 1998
) and stimulating the activity of replicative DNA polymerases during germination (Vázquez-Ramos and Reyes, 1990
; Gómez-Roig and Vázquez-Ramos, 2003
). On the other hand, abscisic acid (ABA) inhibits germination, perhaps through inhibition of cell cycle processes in G1 (Swiatek et al., 2002
), since this phytohormone can induce the expression of cyclin-dependent kinase inhibitors that bind and inhibit Cdk-A activity (Wang et al., 1998
).
Assuming that the G1 phase transition is an important process during germination, and given that PCNA-associated kinase is important in the G1 phase, does this kinase complex participate in the regulation of the germination process by phytohormones? It is shown here that there is a differential cell cycle and kinase response when maize axes are imbibed in the presence of BA or ABA, which may indicate that these phytohormones influence the germination status of seeds, at least partly, by affecting the cell cycle.
| Materials and methods |
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Materials
Protein A-agarose and protease inhibitor cocktail tablets (CompleteTM) were from Roche; hyperfilm ECL, ECL western blotting kit, glutathioneSepharose 4B, anti-rabbit IgG peroxidase conjugate, and [
-32P]ATP (3000 Ci mmol1) were from Amersham Pharmacia Biotech; histone H1 and glutathione were from Gibco BRL; diamine-2-phenylindol (DAPI), benzyladenine (BA), and abscisic acid (ABA) were from Sigma-Aldrich Chemicals; immobilon PVDF membranes were from Millipore; anti-PSTAIRE rabbit polyclonal IgG cat No. sc53 was from Santa Cruz Biotech; and lambda protein phosphatase and p13Suc1 sepharose were from Upstate Biotechnology.
Flow cytometry
The DNA content in maize radicle tips was measured by flow cytometry following imbibition in water, 1 µM BA or 20 µM ABA. To obtain nuclei, maize (Zea mays L. cv. Chalqueño) radicle tips were chopped with a razor blade in the presence of 1.5 ml of a buffer containing 50 mM TRISHCl pH 7.5, 1 mM MgCl2, 0.1% Triton X-100, and 2 mg DAPI. Samples were filtered through a 30 µm nylon membrane. Nuclei were analysed by flow cytometry in a Partec CA II instrument (Partec GMBH, Munster, Germany); 1500 nuclei were counted for each sample at a speed of 10 nuclei s1. The resulting data were processed using the Multicycle program, version 2.53 (Phoenix Flow Systems, San Diego, CA).
Protein extraction
Proteins were obtained from maize embryonic axes from dry seeds or after imbibition in buffer for 3, 6, 15, or 24 h with or without 1 µM BA or 20 µM ABA. Protein extraction buffer (1 ml/15 embryonic axes) contained 25 mM TRISHCl pH 7.5, 15 mM MgCl2, 75 mM NaCl, 25 mM KCl, 5 mM EDTA pH 8.0, 1 mM DTT, 0.2% Triton X-100, 0.25 M sucrose, 60 mM ß-glycerolphosphate, 50 mM NaF, 200 µM Na3VO4, 1 mM EGTA, and a tablet of protease inhibitor cocktail/50 ml buffer. Protein extracts were centrifuged at 150 000 g for 30 min at 4 °C and protein concentrations were determined by the method of Bradford (1976)
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Western blots
Proteins (
25 µg/23 µl protein extract) were separated by SDSPAGE. Gels were blotted onto PVDF membranes and these were incubated either with anti-maize PCNA polyclonal antibody (1:1500 dilution) or with anti-PSTAIRE polyclonal antibody (1:1500 dilution) for 12 h at 4 °C, washed twice in PBS buffer (10 ml each) and once in PBS buffer containing 0.5 M NaCl (10 ml), 15 min each at room temperature, and the membranes incubated for 2 h with peroxidase-conjugated anti-rabbit antibody in a 1:10 000 dilution. The membranes were washed again with 10 ml PBS buffer and the peroxidase reaction was detected by the enhanced chemiluminescence method (ECL). All western blots were repeated a minimum of three times using independent protein extracts.
Immunoprecipitation and pull-down assays
Proteins (100 µg/1215 µl protein extract) were incubated with anti-maize PCNA antibody conjugated with protein Aagarose (30 µl) or with p13Suc1Sepharose beads (10 µl) in 200 µl of PBS buffer overnight at 4 °C. After incubation, beads were washed five times with 200 µl buffer A (25 mM TRISHCl pH 7.5, 125 mM NaCl, 2.5 mM EDTA pH 8.0, 2.5 mM EGTA, 2.5 mM NaF, and 0.1% Triton X-100) and once with kinase assay buffer (200 µl; see below). The resulting protein precipitates or pulled-down proteins were used as the source of kinase activity.
Phosphatase assay
Proteins (25 µg/23 µl protein extract) were incubated with phosphatase buffer (20 µl) that contained 50 mM HEPES pH 7.5, 100 µM EDTA, 2 mM MnCl2, 5 mM DTT, 100 µg ml1 BSA, and 4 U of lambda protein phosphatase for 30 min at 37 °C. Histone H1 phosphorylated by the PCNA-associated kinase activity was used as a control for lambda protein phosphatase activity.
Protein kinase activity
PCNA immunocomplexes or p13Suc1-associated proteins were resuspended in 15 µl of kinase buffer (70 mM TRISHCl pH 7.5, 10 mM MgCl2, 150 mM NaCl, 1 mM DTT, 5 mM EGTA, 20 µM ATP, and 5 µCi [
-32P]ATP). As a substrate, 4 µg GSTZmRBR-C fusion peptide (the C-terminal domain of maize RBR protein) was added per sample. Purification of GSTZmRBR-C fusion peptide was performed according to Ramirez-Parra et al. (1999)
. Reactions were performed for 30 min at 30 °C and were stopped by adding SDS loading buffer (15 µl). After boiling for 5 min, the reaction products were separated by SDSPAGE.
| Results |
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Effect of phytohormones on cell cycle progression during maize germination
Radicle tips of embryonic axes were used to follow the cell cycle status during maize imbibition and germination, since cells in these tissues are the first to enter the cycle (Baíza et al., 1989
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PCNA and Cdk-A content in BA- and ABA-treated maize embryonic axes
The mechanism by which phytohormones influence seed germination is not well known, although it may involve modulating the activity of cell cycle proteins (Liu et al., 1994
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An antibody against the conserved PSTAIRE sequence, characteristic of Cdc2-related proteins, was used to follow maize Cdk-A proteins. As reported previously (Sánchez et al., 2002
To determine whether this 34 kDa band appearing at 15 h of germination in BA- and ABA-treated axes is the product of a phosphorylated 36 or 32 kDa protein, protein extracts were treated with lambda protein phosphatase, which has been reported to dephosphorylate plant Cdk-2 proteins (Umeda et al., 2000
). First, the ability of this phosphatase to dephosphorylate a previously phosphorylated substrate, histone H1, was tested. Histone H1 was incubated in the presence of the PCNA-associated Cdk-A (Sánchez et al., 2002
) and [
-32P]ATP, and the labelled histone H1 served as substrate for the lambda phosphatase. An aliquot of radioactively labelled histone H1 (Fig. 4A, lane 1) was divided in half, one-half receiving the lambda phosphatase (Fig. 4A, lane 2) and the other only receiving the corresponding buffer (Fig. 4A, lane 3). Lambda phosphatase almost completely removed the labelled P from histone H1. Next, lambda phosphatase was mixed with protein extracts from 6 h and 24 h BA-treated embryonic axes. However, no variation in band intensity, or in the electrophoretic mobility, of the 32, 34, or 36 kDa proteins was observed (Fig. 4B), suggesting that the different mobilities of the three Cdk-A proteins are not due to differential phosphorylation. Similar results had been obtained previously using alkaline phosphatase (Sánchez et al., 2002
).
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Protein kinase activity in anti-PCNA immunoprecipitates and the influence of phytohormones
PCNA-associated Cdk-A kinase activity was measured in anti-PCNA immunoprecipitates from control or phytohormone-treated embryonic axes. Kinase activity was normalized to the amount of PCNA immunoprecipitated at each germination time and under the influence of phytohormones. The carboxy-terminal 120 amino acids of the maize pRB homologue, GSTZmRBR-C, was used as substrate. As reported previously (Sánchez et al., 2002
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For comparison purposes, the activity of the Cdk-A protein associated with p13Suc1 was also measured. To normalize this, activity values at different times/treatments were related to western blots of Cdk pulled down by p13Suc1 at every time/treatment. In previous work, it was found that an agarose resin containing the p13Suc1 peptide pulled down only the 36 kDa Cdk-A protein and that the associated kinase activity had a contrasting behaviour to the PCNA-associated Cdk (Sánchez et al., 2002
| Discussion |
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It has been hypothesized that cell cycle activation (particularly the G1 phase) is required for germination to advance and allow seedling growth (Cruz-García et al., 1998
In this paper, it is shown that ABA, a known inhibitor of seed germination, slows down cell cycle advancement during maize germination, compared with control or BA-treated embryonic axes, in which cell cycle activation is evident. This is consistent with reports that seeds deficient in ABA synthesis exhibit more rapid germination and advancement of the cell cycle prior to radicle emergence (Liu et al., 1997
; Downie et al., 1999
). Accumulation of a G1/S marker like PCNA is stimulated by BA, and this accumulation occurs earlier than in control axes, reflecting an earlier entry into the S phase, as has been reported before (Herrera et al., 2000
). On the other hand, the PCNA amount in ABA-treated axes shows only a marginal increase, probably indicating that cells are not being stimulated to enter the S phase, corroborating the flow cytometry results. A differential effect was also observed in the amount of another G1/S marker, the Cdk-A proteins. The amount of the 36 kDa protein increases under all conditions until 15 h of imbibition and, whereas this increasing pattern continues for control and BA treatments, in ABA treatments the 36 kDa protein starts decreasing. This 36 kDa protein, and not the 32 kDa Cdk-A, is preferentially bound by the p13Suc1 protein and, in these complexes, kinase activity is notably enhanced by 15 h of imbibition (Fig. 6B; Sánchez et al., 2002
), suggesting that it acts during the G2 phase. It is thus puzzling that at 24 h of imbibition in the presence of ABA, the p13Suc1-associated kinase activity is highest when the amount of the 36 kDa protein is being reduced (see below). The behaviour of the 32 kDa Cdk-A is also contrasting, as the protein seems to be more stable during the hormonal treatments, whereas its levels decrease earlier during germination in water. Of interest here is that, whereas the levels of the 32 kDa Cdk-A are not very different at 3 and 6 h of imbibition in the three treatments, PCNA-associated kinase activity is higher in control and BA treatments than in ABA treatment, perhaps indicating an ABA-induced inhibitory effect. The appearance of a third protein of 34 kDa in BA- or ABA-treated axes could indicate that either the 32 or the 36 kDa protein was phosphorylated as a result of the hormonal treatment. However, this protein band did not disappear after dephosphorylation with lambda phosphatase. Whether this is a new Cdk-A kinase or whether the 32 or 36 kDa proteins are modified in ways other than phosphorylation remain to be determined.
As is well known, the complexes formed by Cdks and D-type cyclins bound to other proteins like PCNA and p21Cip1 are central to the activation of the cell cycle in mammals (Xiong et al., 1992
). Similar complexes have been found in germinating maize axes. An antibody raised against maize PCNA co-immunoprecipitates two different Cdk-A proteins and a putative cyclin D protein, and this complex contains a protein kinase activity that is active mainly during the early hours of imbibition, a period corresponding to the G1 phase (Cruz-García et al., 1998
; Sánchez et al., 2002
). The PCNA-associated kinase is of the Cdk-A type, since proteins of this type are recognized by anti-PSTAIRE antibodies and kinase activity is inhibited by specific Cdk-A inhibitors (Sánchez et al., 2002
). Here it is shown that anti-PCNA immunoprecipitates from BA-treated axes also show kinase activity that follows a pattern that differs from that described in control axes, since kinase activity is reduced to about half that shown by controls at 3 h of imbibition. Kinase activity from ABA-treated axes is reduced to about one-third of the control. However, while kinase activity is further reduced in control and BA treatments, in ABA treatment this activity remains at similar levels. Thus, the number of G1 kinase complexes associated with PCNA have a tendency to strongly decrease in control and BA treatments, while in ABA treatments, after an initial reduction, kinase activity remains at relatively constant levels and thus is higher at later germination times than in control and BA treatments. Therefore, ABA could be blocking cell cycle progression beyond the G1 phase via an active residual G1 kinase that, in the absence of ABA, should be inactivated so that the next cell cycle phase is triggered. ABA does not appear to produce an all or nothing effect, since the p13Suc1-associated Cdk-A, very likely a G2/M marker, is active during late germination in control or BA- or ABA-treated embryonic axes, although surprisingly, this kinase activity is higher in ABA-treated axes.
The present results suggest that establishment of the G1 phase of the cell cycle is an early component of the germination process in maize embryos. BA may accelerate germination, in part, by stimulating cell cycle progression, while ABA has opposite effects on both cell cycle progression and germination. Conflicting results on the role of, and requirement for, cell cycle activity during germination of diverse seeds may be due, in part, to reliance on flow cytometry, which cannot detect cell cycle activities prior to the S/G2 phase. The proteins and molecular processes associated with entry into and progression through the G1 phase may constitute new and perhaps highly specific molecular markers for seed germination.
| Acknowledgements |
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This work was supported by grants from DGAPA-UNAM (IN-202002) and from the University of California Institute for Mexico and the United States (UC MEXUS) and the Consejo Nacional de Ciencia y Tecnología de México (CONACYT). Additional support was provided by the Western Regional Seed Physiology Research Group.
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-Pase) or with lambda phosphatase buffer only (buffer) and then proteins were processed for western blot assay using the anti-PSTAIRE antibody.


