JXB Advance Access originally published online on September 12, 2006
Journal of Experimental Botany 2006 57(14):3659-3667; doi:10.1093/jxb/erl113
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RESEARCH PAPER |
Acclimation of Rubisco specificity factor to drought in tobacco: discrepancies between in vitro and in vivo estimations
Laboratori de Fisiologia Vegetal, Grup de Biologia de les Plantes en Condicions Mediterrànies, Universitat de les Illes Balears. Carretera de Valldemossa Km 7.5, E-07122 Palma de Mallorca, Balears, Spain
* To whom correspondence should be addressed. E-mail: jaume.flexas{at}uib.es
Received 30 June 2006; Accepted 5 July 2006
| Abstract |
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In studies about the photosynthesis response to environmental stresses, such as drought, the Rubisco specificity factor (
) is assumed to be constant or derived indirectly from gas exchange measurements. However, an analysis of the acclimation of
to drought using in vitro determinations is lacking. The aim of the present work was to analyse the acclimation of
to different drought intensities in tobacco (Nicotiana tabacum L.). Potted tobacco plants were subjected to three different water regimes (100%, 40%, and 15% of field capacity) and new leaves were allowed to develop. When acclimated leaves were fully developed, they were sampled for gas exchange and chlorophyll fluorescence measurements, as well as for the in vitro analysis of Rubisco kinetic properties. Relative water content and gas exchange decreased with increasing water shortage. The apparent Rubisco specificity factor as estimated in vivo by gas exchange decreased with water stress. However, in vitro estimates of
were identical among treatments, as were Rubisco specific initial activity and activation state. The reasons for the observed discrepancy between in vitro and in vivo estimates are profusely discussed. It is suggested that the Rubisco specificity factor does not acclimate to water stress in the short term (weeks or months) in tobacco, and the validity of the so-called Laisk gas exchange method to estimate
under drought is questioned. Key words: Acclimation, drought, Nicotiana tabacum, Rubisco, specificity factor, water stress
| Introduction |
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Rubisco (ribulose-1,5-bisphosphate carboxylase/oxygenase, EC 4.1.1.39 [EC] ) plays a central role in plant photosynthesis since it is involved in the uptake of CO2 by photosynthetic organisms. Besides its carboxylase activity, Rubisco also acts as an oxygenase in a reaction involving competition between O2 and CO2 for reaction with ribulose-1,5-bisphosphate (RuBP). Thus, while photosynthesis is initiated by the carboxylase activity, the oxygenase activity catalyses the first reaction in the photorespiratory pathway (Ogren and Bowes, 1971; Laing et al., 1974). The balance between the two competitive reactions is determined by the kinetic properties of Rubisco and the CO2 and O2 concentrations at the site of the enzyme (Laing et al., 1974):
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), determines the relative rates of the two reactions at any given CO2 and O2 concentrations.
Current models of leaf photosynthesis assume constant
values among C3 plants (Long and Bernacchi, 2003) or derive them indirectly from the CO2 compensation point in the absence of mitochondrial respiration (
*) after gas exchange measurements (Bernacchi et al., 2001). However,
may not be constant under varying environmental conditions, such as light quality and quantity or water stress, although there has been no attempt to assess this possibility. However, the molecular basis and/or structural features determining Rubisco
are still poorly understood (Spreitzer and Salvucci, 2002; Andersson and Taylor, 2003; Spreitzer, 2003). The Rubisco holoenzyme of higher Rubisco is a hexadecamer described as four dimers of large subunits surrounded by two tetramers of small subunits. Two active sites are found at the interface of the large subunits in each dimer, i.e. eight catalytic sites per holoenzyme (Andersson and Taylor, 2003). In higher plants, the Rubisco large subunit is encoded by multiple identical copies of rbcL in the chloroplast genome (Eilenberg et al., 1998), whereas an rbcS gene family having 512 nuclear genes encodes small subunit peptides (Dean et al., 1989; Spreitzer, 2003). Thus, while the copies of the large subunit would probably be the same, the differential expression of rbcS genes may depend on the environment. For instance, transcription of specific rbcS genes appears to be dependent on light quality in the fern Pteris vittata (Eilenberg et al., 1990). Although large subunits have the main influence on catalytic properties, the Rubisco small subunits have also been hypothesized to affect key kinetic characteristics like
(Roy and Andrews, 2000; Parry et al., 2003). Hence, in principle, any environmental condition capable of modulating rbcS gene expression could putatively induce changes in Rubisco
.
Water stress, in particular, induces stomatal closure and a decrease in leaf internal CO2 concentration, which results in increased oxygenase over carboxylase activity, thus increasing the ratio of photorespiration to photosynthesis (Flexas and Medrano, 2002). As a consequence, Delgado et al. (1995) and Kent and Tomany (1995) hypothesized that in hot environments associated with water stress, stomatal closure and low CO2 concentrations at the site of Rubisco may impose increased selection pressure on Rubisco for improved specificity. Indeed, recent results by Galmés et al. (2005) showed that, in a survey of Mediterranean plant species, the highest values of
were observed in Rubisco from plant species growing and adapted for growth in the driest environments. Despite these facts, when applying photosynthesis models to study the effects of water stress on photosynthetic limitations and/or on mesophyll conductance to CO2 (gm), Rubisco
(or
*) is usually assumed to be constant (Roupsard et al., 1995; Wilson et al., 2000; Xu and Baldocchi, 2003; Peña-Rojas et al., 2004; Warren et al., 2004). However, Bota et al. (2002) and Warren et al. (2004) have reported an apparent increase of
* under water stress. This fact merits some attention, since it may change substantially the interpretations of water stress on photosynthesis coming from studies in which
* was assumed as constant. Fluorescence estimates of gm, in particular, are very sensitive to
* (Harley et al., 1992). However, estimations of
* under water stress include a number of assumptions that may not be correct and, as noted by Warren et al. (2004), it would be preferable to determine Rubisco
(or
*) independently using an alternative method. The aim of the present study is to determine whether Rubisco
acclimates to water stress in the short term (weeks) in tobacco plants, by determining
in vitro, and comparing it with in vivo estimates of
*.
| Materials and methods |
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Plant material and treatments
Thirty seeds of Nicotiana tacabum var. White Burley were germinated and grown individually in pots (20 cm height, 4.1 l volume) containing a mixture of claycalcareous soil, horticultural substrate, and perlite (40:40:20 by vol.). The experiment was performed during spring 2004 inside a greenhouse located at the University of the Balearic Islands (Mallorca, Spain). Plants were randomly distributed for growing and spread out to avoid mutual shading and to give similar light and temperature.
All seedlings were well-watered until they had four fully expanded leaves and, presumably, an adequate root system to cope with water constraints. Irrigation treatments were started on 22 April 2004. Ten such plants were randomly selected for each of the irrigation treatments: (i) maintained at field capacity during all experiment (control treatment, C), (ii) maintained at 40% field capacity (moderate drought treatment, MD), and (iii) maintained at 15% field capacity (severe drought treatment, SD). The desired moisture levels were attained by allowing the soil to dry until close to the selected moisture level, as determined gravimetrically by weighing pots on alternate days and, from then on, compensating their daily water losses with the addition of an equal amount of 50% Hoagland's solution.
New leaves were allowed to develop and expand under the three irrigation treatments until 15 June 2004. Then, leaves developed during the irrigation treatments (i.e. acclimated to different water availability) were sampled to determine the leaf mass area (LMA), the relative water content (RWC), and
, total leaf soluble protein, Rubisco activity, gas exchange, and chlorophyll fluorescence.
Rubisco purification and specificity factor measurement
Leaves (3050 g) of each treatment (C, MD, and SD) were collected and immediately frozen in liquid nitrogen. The leaf material was ground to a powder in a mortar, buffer was added and grinding continued from time to time as the mixture thawed. The protein extraction media used contained: 0.1 M Bicine, 10 mM Na-DIECA, 6% PEG (polyethylene glycol) 4000, 3% (w/v) PVP (polyvinylpyrrolidone) 25 000, 1 mM DTT (dithiothreitol), 1 mM benzamidine, 1 mM
-amino-n-caproic acid, and 1 mM PMSF (phenylmethylsulphonylfluoride), at pH 8.
All the purification steps were carried out at 04 °C. Fully thawed but still cold homogenates were filtered through butter muslin and centrifuged at 18 000 g for 20 min. The supernatant liquid was decanted through 50 µm nylon mesh and PEG 4000 was added as a 60% aqueous solution to the supernatant liquid to produce a final concentration of 20% w/v. Also, 1 M MgCl2 was added to a final concentration of 20 mM followed by gentle mixing. After standing for 10 min the mixture was centrifuged again at 18 000 g for 20 min. The pellet was resuspended in 6 ml of column buffer (10 mM TRIS pH 8.0 with 10 mM MgCl2, 10 mM NaHCO3, 1 mM EDTA, and 1 mM KH2PO4) containing 1 mM each of DTT, PMSF, benzamidine, and
-amino-n-caproic acid. The suspension was then centrifuged to remove insoluble material. The supernatant liquid was layered onto step gradients from 1.2 M to 0.4 M in sucrose in the column buffer. Gradients were centrifuged at 50 000 rpm for 120 min in a 70.1Ti rotor (Beckman, High Wycombe, UK). Fractions with a high protein concentration were combined and applied to two 1 ml HiTrap Q HP columns (Amersham Biosciences) connected in series previously equilibrated with column buffer and operated at 1 ml min1. The proteins were eluted using a step gradient from 0 M to 0.8 M NaCl in column buffer and fractions were collected in 1 ml intervals. Total soluble protein content in fractions was confirmed using the Bradford assay (Bradford, 1976). Those fractions with high protein (Rubisco) concentration were combined and stored at 70 °C.
Rubisco-rich fractions were used to make 810 measurements of Rubisco specificity factor (
) per treatment at 25 °C as follows. Rubisco solutions with a high protein concentration were desalted by centrifugation through G25 Sephadex columns (Helmerhorst and Stokes, 1980) previously equilibrated with CO2-free 0.1 M bicine pH 8.2 containing 20 mM MgCl2. The desalted solutions were made 10 mM with NaH14CO3 and 0.4 mM with orthophosphate. These mixtures were incubated at 37 °C for 40 min to activate the Rubisco. Reaction mixtures were prepared in an oxygen electrode (Dual digital Model 20, Rank Brothers Ltd., Cambridge, UK) by first adding 0.93 ml of a solution of 100 mM bicine pH 8.2, 10 mM MgCl2 containing 1.5 mg (7000 W-A units) per 100 ml of carbonic anhydrase and equilibrated with CO2-free air at 25 °C. After adding 0.02 ml of 0.1 M NaH14CO3 the plug was fitted to the oxygen electrode vessel. Enough activated Rubisco was then added to 40 µl for the reaction to be completed in 5 min. When the signal from the electrode was steady, the reaction was started by the addition of 10 µl of 15 mM RuBP. The final volume of the reaction mixture was 1 cm3. RuBP oxygenation was calculated from the oxygen consumption and carboxylation from the amount of 14C incorporated into PGA when all the RuBP had been consumed (Parry et al., 1989). A sequence of reaction mixtures containing pure wheat Rubisco were interspersed with those containing Rubisco from the tobacco plants and the results were normalized to the average
value obtained from wheat Rubisco (102.5 at 25 °C).
Rubisco carboxylase activity and total soluble protein
For Rubisco carboxylase activity, 34 samples per treatment were ground to a fine powder in a mortar, previously chilled with liquid nitrogen and homogenized in 1 ml of an ice-cold extraction medium. The extraction medium was the same as that used for Rubisco purification for
measurements. Extracts were clarified by centrifugation (12 000 rpm at 4 °C for 2 min) and the supernatant immediately assayed at 25 °C for Rubisco activity. The initial and total activities were determined according to Parry et al. (1997). Total soluble protein was determined according to the method of Bradford (1976).
Relative water content and leaf mass area
RWC at mid-morning was determined as follows: RWC=(Fresh weightDry weight)/(Turgid weightDry weight). To determine the turgid weight of the leaves, these were kept in distilled water in darkness at 4 °C to minimize respiration losses, until they reached a constant weight (full turgor, typically after 24 h). Their dry weight was obtained after 48 h at 70 °C in an oven. Six replicates per treatment were obtained.
LMA was calculated, in six replicates per treatment, as the ratio of dry mass to leaf area. Leaf area was determined in fresh leaves using an AM-100 leaf area meter (ADC, Herts, UK).
Gas exchange and chlorophyll fluorescence measurements
Leaf gas exchange parameters were measured simultaneously with measurements of chlorophyll fluorescence using an open gas exchange system (Li-6400; Li-Cor, Inc., Nebraska, USA) with an integrated fluorescence chamber head (Li-640040 leaf chamber fluorometer; Li-Cor, Inc.).
In light-adapted leaves, the actual photochemical efficiency of photosystem II (
PSII) was determined by measuring steady-state fluorescence (Fs) and maximum fluorescence during a light-saturating pulse of c. 8000 µmol m2 s1 (F'm) following the procedures of Genty et al. (1989):
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The electron transport rate (ETR) was then calculated as:
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is a term which includes the product of leaf absorptance and the partitioning of absorbed quanta between photosystems I and II.
was previously determined for each treatment as the slope of the relationship between
PSII and
CO2 obtained by varying light intensity under non-photorespiratory conditions in an atmosphere containing less than 1% O2 (Valentini et al., 1995).
resulted as 0.357, with no difference between treatments. All measurements were started at 25 °C and at 1000 µmol m2 s1 to ensure light saturation, with 10% blue light. Cuvette CO2 concentration (Ca) was set at 400 µmol CO2 mol air1 and the vapour pressure deficit was maintained between 1.0 and 1.5 kPa. After inducing photosynthesis under the above conditions and once steady-state was reached, photosynthesis response curves to varying substomatal CO2 concentration (Ci) were performed. First, the Ca was lowered stepwise from 400 to 50 µmol mol1 and then fixed again at 400 µmol mol1 until reaching a steady-state value similar to that obtained at the beginning of the curve. Then, Ca was increased stepwise from 400 to 1500 µmol mol1. Gas exchange measurements were determined at each step after maintaining the leaf for at least 5 min at the new Ca. Measurements consisted of 1213 measurements for each curve. Leaf respiration in the dark (RD) was measured at the same temperature and CO2 concentration in the same leaves after keeping them for 30 min in darkness.
The rate of non-photorespiratory CO2 evolution in the light (RL) and the substomatal CO2 compensation point in the absence of mitochondrial respiration (Ci*) were estimated according to the method of Laisk (1977) as described by Brooks and Farquhar (1985), i.e. from the response of AN to Ci at three different irradiances (750, 150, and 50 µmol m2 s1). Four to five replicates were made for each treatment. Finally, Ci* was converted to the chloroplast CO2 compensation point (
*) considering the effects of the internal diffusion conductance and RL as in von Caemmerer (2000):
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The apparent Rubisco specificity factor operating in vivo (
*) was determined by the properties of Rubisco (Brooks and Farquhar, 1985) as:
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Cuticular conductance to H2O was measured in four replicates per treatment as described by Boyer et al. (1997). The results showed decreasing values as drought intensified (10 mmol m2 s1 in C, 13 mmol m2 s1 in MD, and 16 mmol m2 s1 in SD). These values were used to correct all Ci values and subsequent estimations.
Net photosynthesis and Ci estimations are also affected by lateral CO2 diffusion through the IRGA's chamber gaskets, particularly when CO2 concentrations inside and outside the chamber are substantially different, as during measurements of AN-Ci curves (Long and Bernacchi, 2003). To establish the magnitude of gasket leakage and correct AN and Ci values, CO2 response curves were made using an inert tobacco leaf thermally killed by submerging it in boiling water. The leaf was submerged in boiling water for some seconds, and then its variable chlorophyll fluorescence in the dark-adapted state was measured using a PAM-2000 (Walz, Effeltrich, Germany). This procedure was repeated until no variable chlorophyll fluorescence was detected (typically a few minutes after initiating boiling), which was taken as an evidence for total photosynthesis impairment and leaf death (Schreiber et al., 1998). Using the relationship between Ca and the apparent photosynthesis of a chamber filled with a dead leaf, the actual AN of live leaves was obtained at each Ca by simple subtraction of the leak flow to the obtained value. Using the corrected AN values, Ci was recalculated using the manufacturer formulas (Long and Bernacchi, 2003).
Estimation of Cc and gm
From combined gas-exchange and chlorophyll fluorescence measurements, the CO2 concentration in the chloroplasts (Cc) was calculated according to Epron et al. (1995). This model works on the assumption that all the reducing power generated by the electron transport chain is used for photosynthesis and photorespiration, and that chlorophyll fluorescence gives a reliable estimate of the quantum yield of electron transport. Thus, the electron transport rate (ETR) measured by chlorophyll fluorescence can be divided into two components: ETR=ETRA+ETRP, where ETRA is the fraction of ETR used for CO2 assimilation, and ETRP is the fraction of ETR used for photorespiration. ETRA and ETRP can be solved from data of AN, RL, and ETR, and from the known stochiometries of electron use in photosynthesis and photorespiration, as follows (Epron et al., 1995; Valentini et al., 1995): ETRA=1/3[ETR+8(AN+RL)]; ETRP=2/3[ETR4(AN+RL)].
The ratio ETRA to ETRP is related to the Cc/O ratio in the chloroplast through the Rubisco specificity factor (
), as follows (Laing et al., 1974):
=(ETRA/ETRP)/(Cc/O). Using the values of
previously determined in vitro for each treatment, and assuming O to be equal to the molar fraction in the air, the above equation was solved for Cc. The mesophyll conductance to CO2 was then calculated as:
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The estimated Cc values were used to convert ANCi curves into ANCc curves (Terashima and Ono, 2002; Manter and Kerrigan, 2004). From ANCc curves, the maximum carboxylation capacity (Vc,max) was calculated (Long and Bernacchi, 2003).
| Results and discussion |
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Acclimation to water stress: water relations and photosynthetic parameters
Despite the acclimation of the leaves to water deficit, a decreased water supply resulted in large decreases in RWC, from 83.4% in C to 75.0 and 65.1% in MD and SD treatments, respectively (Table 1). As expected, AN and gs also decreased with decreasing water availability (Table 1). AN decreased from 23.3 µmol CO2 m2 s1 in C to 16.9 µmol CO2 m2 s1 in MD and 7.9 µmol CO2 m2 s1 in SD, while the stomatal conductance to CO2 (gs) decreased from 230 mmol CO2 m2 s1 in C to 119 mmol CO2 m2 s1 in MD and 46 mmol CO2 m2 s1 in SD. ETR decreased to a much lesser extent than AN, from 191 in C to 139 µmol m2 s1 in SD, possibly indicating an increased electron partitioning towards sinks other than photosynthesis, mainly photorespiration (Cornic and Massacci, 1996; Flexas and Medrano, 2002). Acclimation to drought resulted in an increased LMA and a somewhat increased total soluble protein content (Table 1). However, the Rubisco specific initial activity and its activation state were similar in all treatments (Table 1), as usually observed in water stress experiments, except when stress is very severe (Flexas et al., 2004). The procedure used to extract Rubisco resulted in a certain loss of the enzyme during extraction, which could explain the low in vitro Rubisco carboxylation activities compared with the maximum rate of carboxylation estimated in vivo (Vc,max), as already discussed by Bota et al. (2004) and Rogers et al. (2001). RD remained similar (2.4±0.2 µmol CO2 m2 s1) for all treatments.
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Water stress also resulted in significantly different ANCi responses (Fig. 1). The operational Ci (i.e. the Ci at atmospheric Ca) declined as water stress intensified, from 261 µmol mol1 in C to 170 µmol mol1 in MD and 53 µmol mol1 in SD, pointing to an increased stomatal limitation to photosynthesis (Cornic and Fresneau, 2002). However, light- and CO2-saturated photosynthesys (ASAT) also decreased apparently from 27.7 in C to 19.3 and 13.0 in MD and SD treatments, respectively, which suggested an increased non-stomatal limitation to photosynthesis in the stressed leaves (Lawlor, 2002). In addition, both in MD and SD leaves the maximum AN value was attained at an intermediate Ci, suggesting that photosynthesis at high Ci was limited by triose phosphate use (Long and Bernacchi, 2003), a situation sometimes observed under water stress (Flexas et al., 2004). The maximum carboxylation capacity did not differ significantly (P> 0.05) among treatments (Table 1). All the plants maintained their operational Ci at the breakpoint between CO2-limited and RuBP- and/or TPU-limited photosynthesis, which has been interpreted as an acclimation to optimize both the photochemical and biochemical photosynthetic reactions (von Caemmerer and Farquhar, 1984).
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However, the validity of ANCi analysis has been questioned, particularly in water-stress experiments where gm usually decreases in parallel with gs (Flexas et al., 2002, 2004; Centritto et al., 2003; Warren et al., 2004), as actually occurs in the present study (Fig. 2). These results are very similar to those often encountered using other methods for the estimation of gm that do not rely on previous knowledge of the in vitro
, which supports the validity of our estimations (Loreto et al., 1992; Evans and Loreto, 2000; Flexas et al., 2004). It may be argued, however, that gm estimations (and ANCi curves) are not reliable under drought due to the incorrect estimations of Ci associated with heterogeneous stomatal closure (Terashima, 1992; Buckley et al., 1997; Mott and Buckley, 1998). However, from combined gas-exchange and chlorophyll fluorescence measurements, ANCc curves can be obtained that are totally independent of Ci estimations (Sánchez-Rodríguez et al., 1999).
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Clearly, all the differences observed between treatments in the ANCi curves disappeared in the AN-Cc curves (Fig. 3), as already shown by Sánchez-Rodríguez et al. (1999) in water-stressed Casuarina equisetifolia. This is consistent with the constancy of Rubisco Vc,max and activation state, determined in vitro (Table 1). The only difference between treatments is the fact that MD and SD leaves attain, for the same range of Ca, maximum Cc values much lower than C leaves, due to the superimposed decreasing stomatal and mesophyll conductances to CO2. It is interesting to note that, in ANCc curves, CO2-limited and RuBP-limited regions can be differentiated only in well-watered plants, which maintain their operational Cc at the breakpoint between these two limitations. By contrast, MD and SD operate at the CO2-limited region. This is due to the superimposition of two different effects, a decrease of average gm due to water stress and a more dynamic decrease of gm with increasing Ci during ANCi curves measurements, as already demonstrated by Centritto et al. (2003).
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In vivo and in vitro estimations of Rubisco specificity
The rate of respiration in the light (RL) was estimated following the method described by Laisk (1977) and Brooks and Farquhar (1985). RL was strongly reduced compared with RD, as usually observed (Villar et al., 1994, 1995). In addition, significant differences (P< 0.05) were observed in RL between plants subjected to SD (0.2 µmol m2 s1) and to MD and C (0.5 µmol m2 s1) (Table 2). It is worth noting that RL estimations are strongly affected by lateral leakage through the IRGA's chamber gaskets as well as by cuticular conductance to CO2 and water. Thus, without correcting AN and Ci values to account for these effects, in C plants RL resulted in 1.1 µmol CO2 m2 s1 but decreased to 0.5 µmol CO2 m2 s1 when corrections were taken into account. Similar reductions were observed in MD and SD plants (not shown). The same method yields a value of Ci at the intersection of the three ANCi curves (Ci*), which has been used as a proxy for the CO2 compensation point in the absence of mitochondrial respiration (Brooks and Farquhar, 1985; Villar et al., 1994, 1995). As for RL, Ci* estimations are also strongly affected by lateral leakage through the IRGA's chamber gaskets as well as by cuticular conductance to CO2 and water. For instance, Ci* resulted in 39.5 µmol mol1 in C plants before corrections, while it was only 36.5 µmol mol1 after corrections. The magnitude of these differences was even larger in water-stressed plants. In SD, for instance, a value of 73.4 µmol mol1 was obtained prior to corrections compared with 56.7 µmol mol1 after corrections. Hence, when using the Laisk method to estimate both RL and Ci*, special care needs to be taken to determine leakage and cuticular conductance accurately, particularly in water-stressed plants.
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Even taking into account the corrections, Ci* strongly differed among treatments (Table 2), from 36.5 µmol mol1 in C to 39.8 µmol mol1 in MD and up to 56.7 µmol mol1 in SD. This pattern is in accordance with that observed by Bota et al. (2002) and Warren et al. (2004) in grapevines and Douglas-fir, respectively, and may be interpreted as an indication that water stress induces changes in the Rubisco specificity factor (see estimations of in vivo apparent
* from Ci* values in Table 2). However, it has been pointed out that a more precise estimation of the CO2 photocompensation point in the absence of respiration (
*) should take into account respiratory CO2 flux and mesophyll conductance to CO2 (von Caemmerer, 2000; Peisker and Apel, 2001). Warren et al. (2004) suggested that the fact that Ci* estimations do not take into account variable gm could be on the basis of the observed discrepancies between in vivo and in vitro estimations. However, when
* was estimated using the reported values of Ci*, RL, and gm, the discrepancies between treatments were even larger (Table 2).
In vivo apparent
(
Cc*) estimated from
* according to Brooks and Farquhar (1985), resulted in the following values: 103.1 in C, 92.4 in MD, and 62.1 in SD (Table 2). However, when
was measured in vitro there were no significant differences between treatments (Table 2). The in vitro
averaged 99.3, which did not differ significantly from that of wheat. Therefore,
Cc* largely underestimated
in SD, and resulted in being similar to it in C and MD. An improved Rubisco specificity has recently been reported for Mediterranean species inhabiting the driest and hottest areas (Galmés et al., 2005), however, the present study demonstrates that in vitro Rubisco
is stable during acclimation to drought, which is in accordance with the use of stable values of
* (Roupsard et al., 1996).
Possible causes to explain the observed discrepancies between in vivo and in vitro estimations of Rubisco specificity
The large difference observed between the in vitro and the in vivo
and the fact that in vivo estimations show a water-stress effect of Rubisco specificity factor, while in vitro estimations show a constant value, suggests that one of the two methods is not reliable, particularly under water-stress conditions. While, a priori, the misleading method could either be the in vitro or the in vivo one, the former is a well-established enzymatic method while the latter is very sensitive to small errors in the calculation of AN, Ci, RL, or gm, of which a number has been described (Long and Bernacchi, 2003). Therefore, the authors believe that the differences come from the fact that the Laisk method, although yielding quite approximate estimates in control plants, is unable to cope with the large number of different small errors that occur in the calculation of the above parameters in drought-stressed plants. The differences between Ci* and
* for a given treatment are relatively small compared with the large differences in both parameters between treatments (Table 2). Hence, misleading estimations of RL or gm cannot explain the observed discrepancies between the in vivo and in vitro methods. Rather, these arise from differences in Ci*, which is strongly dependent on the correct estimations of AN and, particularly, Ci. Among the reported limitations that could affect the estimations of AN and Ci using commercial gas-exchange systems, therefore possibly inducing the observed discrepancies between the in vivo and in vitro methods, are (i) interference of cuticular conductance (Boyer et al., 1997), (ii) leaks through the IRGA chamber gaskets (Long and Bernacchi, 2003), (iii) heterogeneous (patchy) stomatal closure (Terashima, 1992; Buckley et al., 1997; Mott and Buckley, 1998), (iv) edge effects (Pons and Welschen, 2002), and (v) lateral flux of CO2 through the internal air space (Jahnke and Krewitt, 2002; Pieruschka et al., 2005).
Cuticular conductance may have a great effect on Ci at low gs, but this was measured and the values corrected accordingly, as was leakage (see Materials and methods). This leaves patchy stomatal closure, edge effects, and lateral diffusion in the mesophyll as the most likely causes for the observed bias.
Patchy stomatal closure is known to impair Ci calculations and to occur under certain water-stress situations (Terashima, 1992; Buckley et al., 1997; Mott and Buckley, 1998). However, it occurs mostly when stress is applied rapidly, and not under progressive water stress (Gunasekera and Berkowitz, 1992). Hence, it is unlikely that the leaves used here, which have been stress-acclimated for their entire life, suffer patchy stomatal closure. Even if some was present, its effects on Ci estimations would be relatively minor, since these are important only when gs is lower than 0.03 mol H2O m2 s1 (Buckley et al., 1997; Flexas et al., 2002), but perhaps important for the determination of
*, where the observed range of values was small (about 20 µmol mol1 of difference between C and SD plants, compared with a difference in operational Ci of about 200 µmol mol1).
Edge effects come from the fact that, due to design of leaf chambers, the gaskets cause the photosynthesizing surface to be surrounded by tissue in darkness that is respiring. This respired CO2 will decrease the measured net flux, i.e. lead to underestimated AN and, consequently, erroneous Ci. Pons and Welschen (2002) showed that the effect was important at low light (about 25% underestimation of AN) but negligible at high light. Therefore, this effect may change the slope of the ANCi curve at low light but not at high light, hence probably modifying the interception point and thus affecting
*. However, an estimation using the data from Pons and Welschen (2002) reveals that
* is almost unaffected by this effect either in C, MD, or SD plants (data not shown). Therefore, it is unlikely that edge effects account for the observed differences between treatments.
Finally, lateral diffusion through air space in the mesophyll has been shown to occur, particularly in homobaric species such as tobacco (Jahnke and Krewitt, 2002; Pieruschka et al., 2005). This occurs due to the fact that illuminated mesophyll patches inside IRGA's leaf chamber and the surrounding mesophyll patches darkened under the leaf chamber gaskets have different Ci, since the cells in the former patches are photosynthesizing while those in the latter are respiring. This gradient causes a lateral flux of CO2 from the darkened air spaces to the illuminated air spaces. This leads to underestimations of the true photosynthesis (since a part of the CO2 used by illuminated cells comes from the surrounding internal spaces of the leaves, not from the IRGA chamber) and the corresponding errors in the estimation of Ci. While it is difficult to estimate the magnitude of such an effect and to use its knowledge to correct the values, it is reasonable to think that this may be most important at high light (i.e. high photosynthesis leading to decreased Ci in the illuminated patches, hence maximizing the lateral CO2 gradient). This would lead to an almost parallel displacement of the ANCi curve at high light with a small effect on that at low light, hence displacing
* to lower values. Using similar reasoning, it is likely that this effect is much larger in water-stressed plants, since they do have a much lower Ci than the controls in the illuminated mesophyll with similar Ci under the gaskets, i.e. a much larger lateral CO2 gradient. Therefore, lateral diffusion through the air spaces in the mesophyll is likely to cause an important part of the observed differences in
* between treatments.
Together, all these possible errors lead to misleading estimations of
*, particularly under water stress. In contrast to all the uncertainties and discrepancies regarding technical problems when using the Laisk method, calculating
* from the linear relationship at low Cc between gross photosynthesis (i.e. the sum of AN and RL) and Cc (Long and Bernacchi, 2003), resulted in a single value for all treatments (39 µmol mol1) which, obviously, reflected a
value (99) very close to that determined in vitro.
| Concluding remarks |
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In summary, the present results clearly show that the Rubisco specificity factor does not acclimate to water stress in the short term (weeks or months) in tobacco. The observations by Galmés et al. (2005) that the highest values of
are observed in Rubisco from plants adapted to the driest environments may reflect an adaptation mechanism operating over a much longer time-scale (i.e. generations).
The comparison of in vitro and in vivo estimated
values clearly support the conclusion by Warren et al. (2004) that, in plants with restricted photosynthesis (e.g. water stressed), it would be preferable to determine
independently of gas-exchange measurements, using an alternative method. In vitro determinations proved to be a suitable means. An alternative would be to estimate
* in control plants using the Laisk method as corrected for RL and gs (von Caemmerer, 2000), and assume that it is not affected by the applied treatments, as our data suggest.
| Acknowledgements |
|---|
This work is part of projects BFI2002-00772 and BFU2005-03102/BFI (Plan Nacional, Spain). JG was supported by an FPU grant from the University of the Balearic Islands. We are indebted to Drs O Atkin, F Loreto, AJ Keys, M Ribas-Carbó, and TD Sharkey for stimulating discussion of the data.
| Abbreviations |
|---|
AN, light-saturated net photosynthesis; ASAT, light- and CO2-saturated photosynthesis; Ca, atmospheric CO2 concentration; Cc, CO2 concentration at the carboxylation site; Ci, substomatal CO2 concentration; Ci*, Ci at the the CO2 compensation point in the absence of mitochondrial respiration; ETR, electron transport rate; gm, CO2 mesophyll conductance; gs, CO2 stomatal conductance; LMA, leaf mass area; PGA, phosphoglyceride acid; RD, leaf respiration in the dark; RL, leaf respiration in the light; Rubisco, ribulose-1,5-bisphosphate carboxylase/oxygenase; RuBP, ribulose-1,5-bisphosphate; RWC, relative water content;
, Rubisco specificity factor;
*, the apparent Rubisco specificity factor operating in vivo;
Cc*, the apparent Rubisco specificity factor operating in vivo on a Cc basis;
Ci*, the apparent Rubisco specificity factor operating in vivo on a Ci basis;
*, Cc at the CO2 compensation point in the absence of mitochondrial respiration; TPU, triosephosphate utilization; Vc,max, maximum rates of carboxylation.| References |
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